RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CCDC144BQ3MJ40 725 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ZCWPW2Q504Y3 356 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 FAM26FQ5R3K3 315 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 NELFCDQ8IXH7 590 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 RDM1Q8NG50 284 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
RIF1-208ENST00000457745 CD99L2Q8TCZ2 262 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 AFG1LQ8WV93 481 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 NACC1Q96RE7 527 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 PPP1R9BQ96SB3 815 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ZHX3Q9H4I2 956 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 VTA1Q9NP79 307 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ZNF302Q9NR11 478 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 HOOK1Q9UJC3 728 aaKnown RBP9.7□□□□□ -0.86
RIF1-208ENST00000457745 USP20Q9Y2K6 914 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ADGRA3Q8IWK6 1321 aa9.7□□□□□ -0.86
RIF1-208ENST00000457745 ARHGEF35A5YM69 484 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 OATP04181 439 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 MYL1P05976 194 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 PSAPP07602 524 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 MUTP22033 750 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
RIF1-208ENST00000457745 PAK1Q13153 545 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 ARID5BQ14865 1188 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 PLCB4Q15147 1175 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 MTERF2Q49AM1 385 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 XKR9Q5GH70 373 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 HERC4Q5GLZ8 1057 aaPredicted RBP9.69□□□□□ -0.86
RIF1-208ENST00000457745 MIS18BP1Q6P0N0 1132 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
RIF1-208ENST00000457745 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 ASAP3Q8TDY4 903 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 SCFD2Q8WU76 684 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 P2RX5Q93086 422 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 SPATA33Q96N06 139 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 APBA2Q99767 749 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 STRA6Q9BX79 667 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 KCTD10Q9H3F6 313 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
RIF1-208ENST00000457745 NRBP1Q9UHY1 535 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 RWDD2AQ9UIY3 292 aa9.69□□□□□ -0.86
RIF1-208ENST00000457745 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
RIF1-208ENST00000457745 CASP8AP2Q9UKL3 1982 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 TEX33O43247 280 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 TGFB1I1O43294 461 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 LGALS2P05162 132 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 KRT18P05783 430 aaKnown RBP9.68□□□□□ -0.86
RIF1-208ENST00000457745 GJB1P08034 283 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 ELNP15502 786 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 CCNE1P24864 410 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 GUCY2CP25092 1073 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 FLT3LGP49771 235 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 FANCCQ00597 558 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 AMPD3Q01432 767 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 GOLGA8FQ08AF8 430 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 GOLGA8DPQ0D2H9 430 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 NEDD9Q14511 834 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 TTLL4Q14679 1199 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
RIF1-208ENST00000457745 COBLL1Q53SF7 1204 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 CENPPQ6IPU0 288 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 SARM1Q6SZW1 724 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 DHX37Q8IY37 1157 aaKnown RBP9.68□□□□□ -0.86
RIF1-208ENST00000457745 ZNF710Q8N1W2 664 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 SEPT1Q8WYJ6 367 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 C16orf70Q9BSU1 422 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 XPO4Q9C0E2 1151 aaKnown RBP9.68□□□□□ -0.86
RIF1-208ENST00000457745 RNPEPQ9H4A4 650 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 MLXIPQ9HAP2 919 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 CYP26B1Q9NR63 512 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 ANKEF1Q9NU02 776 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 RMND1Q9NWS8 449 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 IFNKQ9P0W0 207 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 EVPLQ92817 2033 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 FRMPD3Q5JV73 1810 aa9.68□□□□□ -0.86
RIF1-208ENST00000457745 EMSYQ7Z589 1322 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 FAM13AO94988 1023 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 GH1P01241 217 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 MMP3P08254 477 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 TGFB3P10600 412 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 HOXD8P13378 290 aaPredicted RBP9.67□□□□□ -0.86
RIF1-208ENST00000457745 CYBAP13498 195 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 RGS2P41220 211 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 STAT5BP51692 787 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 BEX3Q00994 111 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 DUSP28Q4G0W2 176 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 CCDC65Q8IXS2 484 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 GUF1Q8N442 669 aaKnown RBP9.67□□□□□ -0.86
RIF1-208ENST00000457745 SPC24Q8NBT2 197 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 KAT2BQ92831 832 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 TMEM143Q96AN5 459 aa9.67□□□□□ -0.86
RIF1-208ENST00000457745 ZNF668Q96K58 619 aaPredicted RBP9.67□□□□□ -0.86
RIF1-208ENST00000457745 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms