RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TCTN1Q2MV58 587 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 TOP1MTQ969P6 601 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 CEP170P1Q96L14 293 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 CCDC43Q96MW1 224 aaKnown RBP25.94■■□□□ 1.74
CBX3-204ENST00000456948 EIF2AK1Q9BQI3 630 aaKnown RBP25.94■■□□□ 1.74
CBX3-204ENST00000456948 CYP26B1Q9NR63 512 aa25.94■■□□□ 1.74
CBX3-204ENST00000456948 MICAL3Q7RTP6 2002 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 VTNP04004 478 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 PDCP20941 246 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 YWHABP31946 246 aaKnown RBP25.93■■□□□ 1.74
CBX3-204ENST00000456948 NLRP11P59045 1033 aaKnown RBP25.93■■□□□ 1.74
CBX3-204ENST00000456948 SPIRE1Q08AE8 756 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 KIZQ2M2Z5 673 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 FAM117BQ6P1L5 589 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 ANO5Q75V66 913 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 LRRC71Q8N4P6 559 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 DYDC2Q96IM9 177 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 RAB34Q9BZG1 259 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 AGO3Q9H9G7 860 aaKnown RBP25.93■■□□□ 1.74
CBX3-204ENST00000456948 RGL1Q9NZL6 768 aa25.93■■□□□ 1.74
CBX3-204ENST00000456948 ENPP3O14638 875 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 MAFO75444 373 aaPredicted RBP25.92■■□□□ 1.74
CBX3-204ENST00000456948 UPP2O95045 317 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 STBD1O95210 358 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 RFC5P40937 340 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 CYP4A11Q02928 519 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 RILPL1Q5EBL4 403 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 MAFAQ8NHW3 353 aaPredicted RBP25.92■■□□□ 1.74
CBX3-204ENST00000456948 YME1L1Q96TA2 773 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 OSBPL7Q9BZF2 842 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 STK24Q9Y6E0 443 aa25.92■■□□□ 1.74
CBX3-204ENST00000456948 LAD1O00515 517 aa25.91■■□□□ 1.74
CBX3-204ENST00000456948 GAS2O43903 313 aaKnown RBP25.91■■□□□ 1.74
CBX3-204ENST00000456948 SLITRK3O94933 977 aa25.91■■□□□ 1.74
CBX3-204ENST00000456948 POLGP54098 1239 aaPredicted RBP25.91■■□□□ 1.74
CBX3-204ENST00000456948 MKRN4PQ13434 485 aaPredicted RBP25.91■■□□□ 1.74
CBX3-204ENST00000456948 CTTNQ14247 550 aaKnown RBP25.91■■□□□ 1.74
CBX3-204ENST00000456948 XKR9Q5GH70 373 aa25.91■■□□□ 1.74
CBX3-204ENST00000456948 HSD17B14Q9BPX1 270 aa25.91■■□□□ 1.74
CBX3-204ENST00000456948 TMEM60Q9H2L4 133 aa25.91■■□□□ 1.74
CBX3-204ENST00000456948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.9■■□□□ 1.74
CBX3-204ENST00000456948 GPR32O75388 356 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 TECP42680 631 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 CUL4AQ13619 759 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 TMCO2Q7Z6W1 182 aaPredicted RBP25.9■■□□□ 1.74
CBX3-204ENST00000456948 LINC01465Q8N7H1 131 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 TCP11Q8WWU5 503 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 NLRP7Q8WX94 980 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 OSMRQ99650 979 aa25.9■■□□□ 1.74
CBX3-204ENST00000456948 INO80BQ9C086 356 aaPredicted RBP25.9■■□□□ 1.74
CBX3-204ENST00000456948 IGKV6-21A0A0C4DH24 114 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 DENND3A2RUS2 1198 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 WNT7AO00755 349 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 LYPLA2O95372 231 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 STAG3L1P0CL83 205 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 XRCC6P12956 609 aaKnown RBP eCLIP25.89■■□□□ 1.74
CBX3-204ENST00000456948 EIF4BP23588 611 aaKnown RBP25.89■■□□□ 1.74
CBX3-204ENST00000456948 TAP1Q03518 808 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 PLA2G4FQ68DD2 849 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 PPP1R16BQ96T49 567 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 GCOM2Q9BZD3 368 aaPredicted RBP25.89■■□□□ 1.74
CBX3-204ENST00000456948 PRDM12Q9H4Q4 367 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 TUFT1Q9NNX1 390 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 ANKEF1Q9NU02 776 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 SUCLA2Q9P2R7 463 aaPredicted RBP25.89■■□□□ 1.74
CBX3-204ENST00000456948 ST3GAL5Q9UNP4 418 aa25.89■■□□□ 1.74
CBX3-204ENST00000456948 NOC2LQ9Y3T9 749 aaKnown RBP25.89■■□□□ 1.74
CBX3-204ENST00000456948 TMEM150BA6NC51 233 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 ZSCAN20P17040 1043 aaPredicted RBP25.88■■□□□ 1.73
CBX3-204ENST00000456948 HTRA4P83105 476 aaPredicted RBP25.88■■□□□ 1.73
CBX3-204ENST00000456948 HAUS3Q68CZ6 603 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 INTS4Q96HW7 963 aaKnown RBP25.88■■□□□ 1.73
CBX3-204ENST00000456948 SH2D3AQ9BRG2 576 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 TSPYL2Q9H2G4 693 aaPredicted RBP25.88■■□□□ 1.73
CBX3-204ENST00000456948 ERVK-5Q9HDB9 667 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 C1orf112Q9NSG2 853 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 LRFN2Q9ULH4 789 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 LOXHD1Q8IVV2 1947 aa25.88■■□□□ 1.73
CBX3-204ENST00000456948 CDH23Q9H251 3354 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 POTEMA6NI47 508 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 GPC3P51654 580 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 NPEPPSP55786 919 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 PTGDRQ13258 359 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 PDIA5Q14554 519 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 ZNF410Q86VK4 478 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 TGS1Q96RS0 853 aaKnown RBP25.87■■□□□ 1.73
CBX3-204ENST00000456948 CEP89Q96ST8 783 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 ADAMTS10Q9H324 1103 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 CDHR5Q9HBB8 845 aa25.87■■□□□ 1.73
CBX3-204ENST00000456948 K7ELQ4 463 aaPredicted RBP25.86■■□□□ 1.73
CBX3-204ENST00000456948 ASAP2O43150 1006 aa25.86■■□□□ 1.73
CBX3-204ENST00000456948 RHPN2Q8IUC4 686 aa25.86■■□□□ 1.73
CBX3-204ENST00000456948 PSPC1Q8WXF1 523 aaKnown RBP25.86■■□□□ 1.73
CBX3-204ENST00000456948 ARNTL2Q8WYA1 636 aa25.86■■□□□ 1.73
CBX3-204ENST00000456948 SAMD11Q96NU1 681 aa25.86■■□□□ 1.73
CBX3-204ENST00000456948 NACC1Q96RE7 527 aa25.86■■□□□ 1.73
CBX3-204ENST00000456948 POLR3CQ9BUI4 534 aaPredicted RBP25.86■■□□□ 1.73
CBX3-204ENST00000456948 DHX33Q9H6R0 707 aaKnown RBP25.86■■□□□ 1.73
CBX3-204ENST00000456948 WRAP73Q9P2S5 460 aaPredicted RBP25.86■■□□□ 1.73
CBX3-204ENST00000456948 GTPBP6O43824 516 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms