RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 SNX5Q9Y5X3 404 aa13.21□□□□□ -0.29
NEDD4L-208ENST00000456173 GOLGA8QA0A0J9YX86 632 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 GOLGA8OA6NCC3 632 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 FAM187AA6NFU0 413 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 GOLGA8NF8WBI6 632 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 IPO5O00410 1097 aaKnown RBP13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 GID8Q9NWU2 228 aa13.21□□□□□ -0.3
NEDD4L-208ENST00000456173 ESRRBO95718 433 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 HSPA4LO95757 839 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 MYL1P05976 194 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 DSG1Q02413 1049 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■■■■ 50.8
NEDD4L-208ENST00000456173 MPP4Q96JB8 637 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 UBE2TQ9NPD8 197 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 PITPNM2Q9BZ72 1349 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 PABPC4Q13310 644 aaKnown RBP eCLIP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 NBPF15Q8N660 670 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 CHRNA3P32297 505 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 LPXNO60711 386 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 MLH1P40692 756 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 PRCCQ92733 491 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-208ENST00000456173 A0A1W2PQC6 194 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 MAP2K7O14733 419 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 DEAF1O75398 565 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 KRT37O76014 449 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 GABPAQ06546 454 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 CASKIN2Q8WXE0 1202 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 METTL5Q9NRN9 209 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 RAB21Q9UL25 225 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 RSPH10B2B2RC85 870 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 AHCYL1O43865 530 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 SERPINI2O75830 405 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 APOA1P02647 267 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 RSPH10BP0C881 870 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 HOXC9P31274 260 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ITIH4Q14624 930 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 USH1GQ495M9 461 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 FSCBQ5H9T9 825 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 H3BRJ5 948 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 OPLAHO14841 1288 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ABCD1P33897 745 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 RAP1GDS1P52306 607 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 HDAC4P56524 1084 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ROR2Q01974 943 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 K7ENM7 598 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 KRT19P08727 400 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 LRRC63Q05C16 580 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 GABPB2Q8TAK5 448 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 AK8Q96MA6 479 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
NEDD4L-208ENST00000456173 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 KLRF2D3W0D1 207 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 ADORA1P30542 326 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 PTK2Q05397 1052 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 BTNL9Q6UXG8 535 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 LPIN2Q92539 896 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 CNBD2Q96M20 576 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 SH3GL1Q99961 368 aa13.18□□□□□ -0.3
NEDD4L-208ENST00000456173 DCLRE1BQ9H816 532 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms