RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 C22orf31O95567 290 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GJA8P48165 433 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 SARSP49591 514 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 ADAM17P78536 824 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GIT2Q14161 759 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GRIK4Q16099 956 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 DYMQ7RTS9 669 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 SESTD1Q86VW0 696 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 EXOC8Q8IYI6 725 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 MCPH1Q8NEM0 835 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 SLC7A3Q8WY07 619 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 ERCC4Q92889 916 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 REEP2Q9BRK0 252 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 ODF2LQ9ULJ1 636 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 PCDHA5Q9Y5H7 936 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 NPHP3-ACAD11A0A0J9YXS1 232 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 A0A1W2PQ45 241 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 A0A1W2PQY0 241 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 CAPN2P17655 700 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 POLGP54098 1239 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 ASIC1P78348 528 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 TBC1D8BQ0IIM8 1120 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 MAPK7Q13164 816 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 EMC2Q15006 297 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 NBPF20Q3BBV1 942 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 MARCH8Q5T0T0 291 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 TRAPPC12Q8WVT3 735 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GLT1D1Q96MS3 346 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GSDMAQ96QA5 445 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 JPH2Q9BR39 696 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 GRIN2DO15399 1336 aa18.42■□□□□ 0.54
CCDC90B-202ENST00000455220 PVALEFA0A1B0GWK0 134 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 MBLAC1A4D2B0 266 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 MAGEB2O15479 319 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 GAS2O43903 313 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 SMC2O95347 1197 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 KRT18P05783 430 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 ZNF131P52739 623 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 UNC13DQ70J99 1090 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 DAW1Q8N136 415 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 SMARCE1Q969G3 411 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 SETD4Q9NVD3 440 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
CCDC90B-202ENST00000455220 HIP1RO75146 1068 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 RPN1P04843 607 aaKnown RBP18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 IGBP1P78318 339 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 EHHADHQ08426 723 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 RAD51AP2Q09MP3 1159 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 HIC1Q14526 733 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 KCNB1Q14721 858 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 MTHFD1LQ6UB35 978 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 LINC01465Q8N7H1 131 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 C7orf31Q8N865 590 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 SLC43A3Q8NBI5 491 aa18.4■□□□□ 0.54
CCDC90B-202ENST00000455220 C17orf102A2RUQ5 167 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 RSPH10B2B2RC85 870 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 TFRCP02786 760 aaKnown RBP18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 RSPH10BP0C881 870 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 KLRC1P26715 233 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 PTPN11Q06124 597 aaPredicted RBP18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 ITGA7Q13683 1181 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 ZSCAN23Q3MJ62 389 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 STARD7Q9NQZ5 370 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 MYH11P35749 1972 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 TRIP12Q14669 1992 aaPredicted RBP18.39■□□□□ 0.53
CCDC90B-202ENST00000455220 EVPLQ92817 2033 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 TBCAO75347 108 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 RHOBTB3O94955 611 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 GNAT1P11488 350 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 IDEP14735 1019 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 RTP1P59025 263 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 MKRN4PQ13434 485 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 CCDC65Q8IXS2 484 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 DRC1Q96MC2 740 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 SEZ6LQ9BYH1 1024 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 PARVGQ9HBI0 331 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 GPRC5CQ9NQ84 441 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 PANK4Q9NVE7 773 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 COL4A3BPQ9Y5P4 624 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 GAP43P17677 238 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 ARL2P36404 184 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 SOX10P56693 466 aa18.38■□□□□ 0.53
CCDC90B-202ENST00000455220 COASYQ13057 564 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms