RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 ZHX3Q9H4I2 956 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 PARVGQ9HBI0 331 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 SUCLA2Q9P2R7 463 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 DIS3Q9Y2L1 958 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-209ENST00000454591 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 CCDC188H7C350 402 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 PPFIA4O75335 1185 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 FTCDO95954 541 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 GLI1P08151 1106 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 H2AFZP0C0S5 128 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 STAT1P42224 750 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 CASP4P49662 377 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 MAP3K10Q02779 954 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 RPS6KA1Q15418 735 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 CEP55Q53EZ4 464 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 H2AFVQ71UI9 128 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 GSPT2Q8IYD1 628 aaKnown RBP13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 SYCE1Q8N0S2 351 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 TPCN2Q8NHX9 752 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 TAF4BQ92750 862 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
ECHDC1-209ENST00000454591 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 MAPK13O15264 365 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 PMM2O15305 246 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 HSF2BPO75031 334 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 CCDC172P0C7W6 258 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 HOXA13P31271 388 aaPredicted RBP13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 SOX5P35711 763 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 HSD17B4P51659 736 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 HADHBP55084 474 aaKnown RBP13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 SNAP25P60880 206 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 GCNT4Q9P109 453 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 ZNF536O15090 1300 aa13.66□□□□□ -0.22
ECHDC1-209ENST00000454591 SRRM3A6NNA2 597 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.227e-10■■■□□ 16
ECHDC1-209ENST00000454591 P4HA2O15460 535 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 RAD21O60216 631 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 PHACTR2O75167 634 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 LYPLA2O95372 231 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 TMEM253P0C7T8 217 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 LMNB1P20700 586 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 HSPA9P38646 679 aaKnown RBP13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 FMO5P49326 533 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 SNRPFP62306 86 aaKnown RBP13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 CUL1Q13616 776 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 AOC3Q16853 763 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 LRIG3Q6UXM1 1119 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 HS2ST1Q7LGA3 356 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 SEC14L1Q92503 715 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 ISCUQ9H1K1 167 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 SMARCAL1Q9NZC9 954 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 AJAP1Q9UKB5 411 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 CNTNAP1P78357 1384 aa13.65□□□□□ -0.22
ECHDC1-209ENST00000454591 F8VZ95 297 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 GAS7O60861 476 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 POLD1P28340 1107 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 ECE1P42892 770 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 MAPK7Q13164 816 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 KIF22Q14807 665 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 CLUL1Q15846 466 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 SRLQ86TD4 932 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 MYCT1Q8N699 235 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 HES6Q96HZ4 224 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PSMB7Q99436 277 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.237e-6■■■■□ 21.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms