RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PDLIM7Q9NR12 457 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 ATG3Q9NT62 314 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 MYOTQ9UBF9 498 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 DPP7Q9UHL4 492 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 DMTF1Q9Y222 760 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 NUMBLQ9Y6R0 609 aa5.28□□□□□ -1.56
HMGN3P1-201ENST00000453847 CCDC154A6NI56 674 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 NFIBO00712 420 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 NRDCO43847 1150 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 MPIG6BO95866 241 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 IGLV1-40P01703 118 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 PFKMP08237 780 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 ZKSCAN1P17029 563 aaPredicted RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 HOXA10P31260 410 aaPredicted RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 HALP42357 657 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 SLC6A11P48066 632 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 AGFG1P52594 562 aaKnown RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 CHAF1AQ13111 956 aaPredicted RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 KRT72Q14CN4 511 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 AOC3Q16853 763 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 C3orf36Q3SXR2 165 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 TUBB8Q3ZCM7 444 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 MBNL2Q5VZF2 373 aaKnown RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 NPNTQ6UXI9 565 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 CCDC149Q6ZUS6 474 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 NME9Q86XW9 330 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 WFDC3Q8IUB2 231 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 ZDHHC13Q8IUH4 622 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 DENND1CQ8IV53 801 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 ARRDC4Q8NCT1 418 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 ERCC4Q92889 916 aaPredicted RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 RAX2Q96IS3 184 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 SGCZQ96LD1 299 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 TBCBQ99426 244 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 METTL22Q9BUU2 404 aaPredicted RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 APOL5Q9BWW9 433 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 CARS2Q9HA77 564 aaKnown RBP5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 IFT122Q9HBG6 1241 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 RXFP1Q9HBX9 757 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 KCNG1Q9UIX4 513 aa5.27□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRAMEF25A6NGN4 478 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 TBX3O15119 743 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 CYP26A1O43174 497 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 PQBP1O60828 265 aaKnown RBP5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 SETSIPP0DME0 302 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 TYRP1P17643 537 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 HTR1BP28222 390 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 HERVK_113P62684 666 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 CDK17Q00537 523 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 DSC2Q02487 901 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 BNIP3Q12983 259 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 KIAA0753Q2KHM9 967 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 PGS1Q32NB8 556 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 HSP90AB4PQ58FF6 505 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 C1orf228Q6PIY5 440 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 CEP128Q6ZU80 1094 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 SYDE1Q6ZW31 735 aaPredicted RBP5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 PHOSPHO1Q8TCT1 267 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 NRG4Q8WWG1 115 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 ATXN2LQ8WWM7 1075 aaKnown RBP5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 AUTS2Q8WXX7 1259 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 MAML3Q96JK9 1138 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 HRASLS5Q96KN8 279 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 FAM204AQ9H8W3 233 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 CASS4Q9NQ75 786 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 TPSG1Q9NRR2 321 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 LUZP4Q9P127 313 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRSS50Q9UI38 385 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 SCOCQ9UIL1 159 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 PALD1Q9ULE6 856 aa5.26□□□□□ -1.57
HMGN3P1-201ENST00000453847 UBA6A0AVT1 1052 aaPredicted RBP5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRAMEF22A3QJZ6 481 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 RNF225M0QZC1 329 aaPredicted RBP5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 NBNO60934 754 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 WDHD1O75717 1129 aaPredicted RBP5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRLP01236 227 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 ITGB2P05107 769 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 MTHFD2P13995 350 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 FOSL1P15407 271 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRKCAP17252 672 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 AOAHP28039 575 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 MC4RP32245 332 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PIK3CBP42338 1070 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 WASP42768 502 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 RGS3P49796 1198 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 FAM193AP78312 1265 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRKCQQ04759 706 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 STK3Q13188 491 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 RAPGEF1Q13905 1077 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 TTC38Q5R3I4 469 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PRAMEF18Q5VWM3 479 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 KIAA1841Q6NSI8 718 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 KRT78Q8N1N4 520 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 C7orf31Q8N865 590 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PLBD2Q8NHP8 589 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PNISRQ8TF01 805 aaKnown RBP5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 ASB11Q8WXH4 323 aa5.25□□□□□ -1.57
HMGN3P1-201ENST00000453847 PPM1EQ8WY54 764 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms