RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 EFCAB14O75071 495 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 BMP15O95972 392 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 VTNP04004 478 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 CTTNQ14247 550 aaKnown RBP16.4■□□□□ 0.22
VPS16-205ENST00000453689 RAB30Q15771 203 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 TSHZ1Q6ZSZ6 1077 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 C4orf19Q8IY42 314 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 LRRC71Q8N4P6 559 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 APBB2Q92870 758 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 TIFAQ96CG3 184 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 FAM161BQ96MY7 647 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 TTYH1Q9H313 450 aaPredicted RBP16.4■□□□□ 0.22
VPS16-205ENST00000453689 AGO3Q9H9G7 860 aaKnown RBP16.4■□□□□ 0.22
VPS16-205ENST00000453689 MYH11P35749 1972 aa16.4■□□□□ 0.22
VPS16-205ENST00000453689 FNDC1Q4ZHG4 1894 aaPredicted RBP16.39■□□□□ 0.22
VPS16-205ENST00000453689 LAD1O00515 517 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 SLITRK3O94933 977 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 NPEPPSP55786 919 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
VPS16-205ENST00000453689 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
VPS16-205ENST00000453689 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
VPS16-205ENST00000453689 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 NEK9Q8TD19 979 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 USP28Q96RU2 1077 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 ZSWIM4Q9H7M6 989 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 CDHR5Q9HBB8 845 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 MTMR10Q9NXD2 777 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 YBX2Q9Y2T7 364 aaKnown RBP16.39■□□□□ 0.21
VPS16-205ENST00000453689 PCDHA11Q9Y5I1 949 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 SQORQ9Y6N5 450 aa16.39■□□□□ 0.21
VPS16-205ENST00000453689 COL4A4P53420 1690 aaPredicted RBP16.39■□□□□ 0.21
VPS16-205ENST00000453689 TMEM265A0A087WTH1 108 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 GPR32O75388 356 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 MYOGP15173 224 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 TMOD1P28289 359 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 CD52P31358 61 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 TECP42680 631 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 ATP2C1P98194 919 aaPredicted RBP16.38■□□□□ 0.21
VPS16-205ENST00000453689 PTGDRQ13258 359 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 FOXD4L6Q3SYB3 417 aaPredicted RBP16.38■□□□□ 0.21
VPS16-205ENST00000453689 FOXD4L3Q6VB84 417 aaPredicted RBP16.38■□□□□ 0.21
VPS16-205ENST00000453689 TPH2Q8IWU9 490 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 ZNF579Q8NAF0 562 aaKnown RBP16.38■□□□□ 0.21
VPS16-205ENST00000453689 USP38Q8NB14 1042 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 HSD17B14Q9BPX1 270 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 SUGCTQ9HAC7 445 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 CYP26B1Q9NR63 512 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 AKT3Q9Y243 479 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 CLIC4Q9Y696 253 aa16.38■□□□□ 0.21
VPS16-205ENST00000453689 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.37■□□□□ 0.21
VPS16-205ENST00000453689 ZBTB39O15060 712 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 YWHABP31946 246 aaKnown RBP16.37■□□□□ 0.21
VPS16-205ENST00000453689 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
VPS16-205ENST00000453689 DNM1Q05193 864 aaKnown RBP16.37■□□□□ 0.21
VPS16-205ENST00000453689 DRP2Q13474 957 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 KIZQ2M2Z5 673 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 TMEM40Q8WWA1 233 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 CEP170P1Q96L14 293 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 OSMRQ99650 979 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 SEMA6BQ9H3T3 888 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 PADI3Q9ULW8 664 aa16.37■□□□□ 0.21
VPS16-205ENST00000453689 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 LYPLA2O95372 231 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 YEATS4O95619 227 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 AMHP03971 560 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 PRPHP41219 470 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS16-205ENST00000453689 CRYBB1P53674 252 aaPredicted RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 NLRP11P59045 1033 aaKnown RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 KRT85P78386 507 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 PAK2Q13177 524 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 PTPAQ15257 358 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 OTUD6AQ7L8S5 288 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 ZNF576Q9H609 170 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 DHX33Q9H6R0 707 aaKnown RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 TUFT1Q9NNX1 390 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 NOC2LQ9Y3T9 749 aaKnown RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 PPME1Q9Y570 386 aa16.36■□□□□ 0.21
VPS16-205ENST00000453689 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
VPS16-205ENST00000453689 COL4A6Q14031 1691 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 TLL1O43897 1013 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 MED24O75448 989 aa16.35■□□□□ 0.21
VPS16-205ENST00000453689 GJB5O95377 273 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms