RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TPM4P67936 248 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PLCB2Q00722 1185 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 SP3Q02447 781 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PLCB4Q15147 1175 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 BMT2Q1RMZ1 405 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 MTERF2Q49AM1 385 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 FAM160B1Q5W0V3 765 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 ZNF720Q7Z2F6 126 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 TRMT1LQ7Z2T5 733 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 ZC3H3Q8IXZ2 948 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 MYCT1Q8N699 235 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 MRFAP1L1Q96HT8 127 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 CEP170P1Q96L14 293 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 NAP1L5Q96NT1 182 aaPredicted RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 APBA2Q99767 749 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 TIPINQ9BVW5 301 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 SRRTQ9BXP5 876 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 TRIM5Q9C035 493 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 XPO4Q9C0E2 1151 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 ZHX3Q9H4I2 956 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 DHX33Q9H6R0 707 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 PARVGQ9HBI0 331 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 GPRC5CQ9NQ84 441 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 INTS13Q9NVM9 706 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 IFNKQ9P0W0 207 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 SEL1LQ9UBV2 794 aa6.64□□□□□ -1.35
SDC4P-201ENST00000453285 LIMA1Q9UHB6 759 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 SEPT9Q9UHD8 586 aaPredicted RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 GNEQ9Y223 722 aaKnown RBP6.64□□□□□ -1.35
SDC4P-201ENST00000453285 BICDL2A1A5D9 508 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NOP56O00567 594 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 CITO14578 2027 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 EIF3DO15371 548 aaKnown RBP eCLIP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TGFB1I1O43294 461 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 PPFIA4O75335 1185 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TRPA1O75762 1119 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 DGAT1O75907 488 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 MMP3P08254 477 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 PLS3P13797 630 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 FLT3LGP49771 235 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NCKAP1LP55160 1127 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 SOX10P56693 466 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TNFAIP2Q03169 654 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 LRRC63Q05C16 580 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 KCNA1Q09470 495 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 MAPK8IP2Q13387 824 aaPredicted RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NR1I3Q14994 352 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 KNOP1Q1ED39 458 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 HSP90AA4PQ58FG1 418 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ODR4Q5SWX8 454 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 LRRC55Q6ZSA7 311 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 MAEAQ7L5Y9 396 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TRIM50Q86XT4 487 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 KSR1Q8IVT5 923 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NELFCDQ8IXH7 590 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TRPV1Q8NER1 839 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 PPTC7Q8NI37 304 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ATP8B4Q8TF62 1192 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NOC3LQ8WTT2 800 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 AFG1LQ8WV93 481 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 BBXQ8WY36 941 aaPredicted RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TRIB2Q92519 343 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ANP32BQ92688 251 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NTPCRQ9BSD7 190 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 C16orf70Q9BSU1 422 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 IKZF4Q9H2S9 585 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ST6GALNAC4Q9H4F1 302 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 SMARCAD1Q9H4L7 1026 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 THAP9Q9H5L6 903 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 MRPL44Q9H9J2 332 aaKnown RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 NRBP2Q9NSY0 501 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 ZHX1Q9UKY1 873 aaPredicted RBP6.63□□□□□ -1.35
SDC4P-201ENST00000453285 TRAF3IP3Q9Y228 551 aa6.63□□□□□ -1.35
SDC4P-201ENST00000453285 UBE4BO95155 1302 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 IGKV6-21A0A0C4DH24 114 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 A0A1B0GTH6 734 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 A6NJR5 290 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 KCNJ18B7U540 433 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 PDXKO00764 312 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 HBP1O60381 514 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 MAFO75444 373 aaPredicted RBP6.62□□□□□ -1.35
SDC4P-201ENST00000453285 GCNT3O95395 438 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 LGALS2P05162 132 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 CYBAP13498 195 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
SDC4P-201ENST00000453285 MARK3P27448 753 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 ARL2P36404 184 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 PBX1P40424 430 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 RFC5P40937 340 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 SLC26A2P50443 739 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 COPB1P53618 953 aaKnown RBP6.62□□□□□ -1.35
SDC4P-201ENST00000453285 PEX3P56589 373 aa6.62□□□□□ -1.35
SDC4P-201ENST00000453285 UBASH3AP57075 661 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms