RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 DKK3Q9UBP4 350 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PCDHB12Q9Y5F1 795 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 TMEM247A6NEH6 219 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 SMCO2A6NFE2 343 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 H7C1W4 665 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 ENTPD3O75355 529 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 DYNLL1P63167 89 aaKnown RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 POLA2Q14181 598 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 CLEC17AQ6ZS10 378 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PNMA1Q8ND90 353 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 BEST2Q8NFU1 509 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 RNF139Q8WU17 664 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PARVBQ9HBI1 364 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 SNAP23O00161 211 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 ESRRBO95718 433 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 CRKP46108 304 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 TFAP4Q01664 338 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 ELAVL2Q12926 359 aaKnown RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 HLTFQ14527 1009 aaKnown RBP eCLIP3.86□□□□□ -1.793e-7■■□□□ 13.1
ATM-203ENST00000452508 STILQ15468 1287 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 ZYXQ15942 572 aaKnown RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 PHKG1Q16816 387 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 RNF10Q8N5U6 811 aaKnown RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 CDKL2Q92772 493 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 N4BP2L2Q92802 583 aaPredicted RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 ZNF577Q9BSK1 485 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 MXD3Q9BW11 206 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 NDEL1Q9GZM8 345 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 TROVE2P10155 538 aaKnown RBP eCLIP3.86□□□□□ -1.793e-6■■□□□ 11.8
ATM-203ENST00000452508 PAMP19021 973 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 ADORA1P30542 326 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATM-203ENST00000452508 MXD4Q14582 209 aaPredicted RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 TRIM60Q495X7 471 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 GPBP1Q86WP2 473 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 LDHDQ86WU2 507 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PROCA1Q8NCQ7 364 aaPredicted RBP3.86□□□□□ -1.79
ATM-203ENST00000452508 HAUS4Q9H6D7 363 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 GDPD2Q9HCC8 539 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PKD2L1Q9P0L9 805 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 MYO5BQ9ULV0 1848 aa3.86□□□□□ -1.79
ATM-203ENST00000452508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 SPOPO43791 374 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 HIP1RO75146 1068 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 FGF19O95750 216 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 MMEP08473 750 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SKP1P63208 163 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PPP2R5CQ13362 524 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 RAB44Q7Z6P3 723 aaPredicted RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 FAM186BQ8IYM0 893 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SH3GL3Q99963 347 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 ARHGAP26Q9UNA1 814 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 NEDD4P46934 1319 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 CCL15-CCL14A0A0B4J2E2 113 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 CUTAO60888 179 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PHEXP78562 749 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PTH1RQ03431 593 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 MAPRE1Q15691 268 aaKnown RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 CCL15Q16663 113 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 DGKDQ16760 1214 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 IFNL3Q8IZI9 196 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 ACRBPQ8NEB7 543 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 STAMQ92783 540 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 CCDC42Q96M95 316 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 GIMAP4Q9NUV9 329 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 NRXN3Q9Y4C0 1643 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SMIM23A6NLE4 172 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 RNF40O75150 1001 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PEX14O75381 377 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 IFNA8P32881 189 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 APLP1P51693 650 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 KRT33BQ14525 404 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PKN2Q16513 984 aaKnown RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 TWF2Q6IBS0 349 aaKnown RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 CHCHD4Q8N4Q1 142 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 GAS2L1Q99501 681 aaPredicted RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 OXCT2Q9BYC2 517 aaPredicted RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 PSD3Q9NYI0 1048 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 DBNLQ9UJU6 430 aaKnown RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 CHD2O14647 1828 aaKnown RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 I3L4J1 428 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 IKBKBO14920 756 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 CD19P15391 556 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 ZNF18P17022 549 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 PAK1Q13153 545 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 COG2Q14746 738 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 GEN1Q17RS7 908 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SLC45A4Q5BKX6 768 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SPDYCQ5MJ68 293 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 MEI1Q5TIA1 1274 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 KRT80Q6KB66 452 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 RSBN1LQ6PCB5 846 aaPredicted RBP3.85□□□□□ -1.79
ATM-203ENST00000452508 GLB1LQ6UWU2 654 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 MICALL2Q8IY33 904 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 A0A0D9SFI3 127 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 UNCXA6NJT0 531 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 GH1P01241 217 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 SLC2A3P11169 496 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 TMEM132BQ14DG7 1078 aa3.85□□□□□ -1.79
ATM-203ENST00000452508 TNIP3Q96KP6 325 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms