RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 DHTKD1Q96HY7 919 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 METTL22Q9BUU2 404 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 SPATA16Q9BXB7 569 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 STMN4Q9H169 189 aaPredicted RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 DPH5Q9H2P9 285 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 EPB41L4BQ9H329 900 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 PABPC3Q9H361 631 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 MMRN2Q9H8L6 949 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 STOML1Q9UBI4 398 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 PRKAG3Q9UGI9 489 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 SIK3Q9Y2K2 1263 aa9.33□□□□□ -0.92
LSM5-208ENST00000450169 UTP11Q9Y3A2 253 aaKnown RBP9.33□□□□□ -0.92
LSM5-208ENST00000450169 BICDL2A1A5D9 508 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 KRIT1O00522 736 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 TTI1O43156 1089 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 ZNF189O75820 626 aaPredicted RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 RASA1P20936 1047 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 KRT2P35908 639 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 SH3BGRP55822 239 aaPredicted RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 TTC38Q5R3I4 469 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 SH2D4BQ5SQS7 431 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 TAOK1Q7L7X3 1001 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 ZC3H18Q86VM9 953 aaKnown RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 GIMAP8Q8ND71 665 aaPredicted RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.32□□□□□ -0.92
LSM5-208ENST00000450169 ZMYND12Q9H0C1 365 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 CCDC113Q9H0I3 377 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 KLHL14Q9P2G3 628 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 CIDEBQ9UHD4 219 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 USTQ9Y2C2 406 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
LSM5-208ENST00000450169 PCDH11XQ9BZA7 1347 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 MYH6P13533 1939 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 LTN1O94822 1766 aa9.32□□□□□ -0.92
LSM5-208ENST00000450169 ATP5HO75947 161 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 MBD4O95243 580 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 SLC34A2O95436 690 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 GNA14O95837 355 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
LSM5-208ENST00000450169 XBP1P17861 261 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 RXRBP28702 533 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 PMS2P54278 862 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 EVX2Q03828 476 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 LSAMPQ13449 338 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 LRRC14Q15048 493 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 HGSNATQ68CP4 663 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 ARMCX6Q7L4S7 300 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 CROCCP2Q86T23 111 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 CCDC84Q86UT8 332 aaPredicted RBP9.31□□□□□ -0.92
LSM5-208ENST00000450169 SMC1BQ8NDV3 1235 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
LSM5-208ENST00000450169 LRRC8CQ8TDW0 803 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 BAP1Q92560 729 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 ANKS1AQ92625 1134 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 GATA6Q92908 595 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 P2RX5Q93086 422 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 HLA-CQ95604 372 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 HAPLN3Q96S86 360 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
LSM5-208ENST00000450169 DCLRE1BQ9H816 532 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 PRDM16Q9HAZ2 1276 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 PRM3Q9NNZ6 103 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 COMMD3-BMI1R4GMX3 469 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 TMEM94Q12767 1356 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.92
LSM5-208ENST00000450169 HNRNPRO43390 633 aaKnown RBP9.31□□□□□ -0.92
LSM5-208ENST00000450169 ENTPD5O75356 428 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 RHOBTB3O94955 611 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 SESN3P58005 492 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 OCRLQ01968 901 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 MGAT5Q09328 741 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 AKNAD1Q5T1N1 836 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 RNF43Q68DV7 783 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 PDXDC1Q6P996 788 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 LMBR1LQ6UX01 489 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 MPRIPQ6WCQ1 1025 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 FBXO41Q8TF61 875 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 HIC2Q96JB3 615 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 TMEM237Q96Q45 408 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 ADAM33Q9BZ11 813 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 TRIM31Q9BZY9 425 aa9.31□□□□□ -0.92
LSM5-208ENST00000450169 TMEM221A6NGB7 291 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 UNCXA6NJT0 531 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 KLRC4O43908 158 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 CCNE1P24864 410 aa9.3□□□□□ -0.92
LSM5-208ENST00000450169 IL15P40933 162 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms