RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ANKRD65E5RJM6 399 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 MED7O43513 233 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 XPOTO43592 962 aaKnown RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 VSNL1P62760 191 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CCNA1P78396 465 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ZNF543Q08ER8 600 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 RAD9BQ6WBX8 426 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 SCARA5Q6ZMJ2 495 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 EXOC8Q8IYI6 725 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ADAM22Q9P0K1 906 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 FLT1P17948 1338 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 P4HBP07237 508 aaKnown RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 SRGNP10124 158 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 MSH2P43246 934 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 QARSP47897 775 aaKnown RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 GABPAQ06546 454 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 SNCBQ16143 134 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 RASGRP2Q7LDG7 609 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CLEC10AQ8IUN9 316 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 SPATA4Q8NEY3 305 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 TBC1D16Q8TBP0 767 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 EIF2AK1Q9BQI3 630 aaKnown RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 VCXQ9H320 206 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 EFCC1Q9HA90 598 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 FEM1BQ9UK73 627 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTC1-202ENST00000449476 TRIM49P0CI25 452 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 TRIM49CP0CI26 452 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ADCY2Q08462 1091 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 IFRD2Q12894 506 aaPredicted RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 MUM1Q2TAK8 710 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 FBXO33Q7Z6M2 555 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 KLHL29Q96CT2 875 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 PFDN4Q9NQP4 134 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 AGPAT5Q9NUQ2 364 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 AGLP35573 1532 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ITIH6Q6UXX5 1313 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CNTNAP5Q8WYK1 1306 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 SAT1P21673 171 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 RXRBP28702 533 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 KRT76Q01546 638 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ZNF211Q13398 564 aaPredicted RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 BBS9Q3SYG4 887 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ZNF394Q53GI3 561 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 OR6B2Q6IFH4 312 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 CFAP61Q8NHU2 1237 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 C7orf25Q9BPX7 421 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
CTC1-202ENST00000449476 SUGT1Q9Y2Z0 365 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
CTC1-202ENST00000449476 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 NOL3O60936 208 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 LDHAP00338 332 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 RASA1P20936 1047 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 VAMP7P51809 220 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 TROAPQ12815 778 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 SURF1Q15526 300 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 ZNF772Q68DY9 489 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 ZNF746Q6NUN9 644 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 ERICH1Q86X53 443 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 RPUSD2Q8IZ73 545 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 LXNQ9BS40 222 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 DENND3A2RUS2 1198 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 DARS2Q6PI48 645 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 KCTD6Q8NC69 237 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 RGL1Q9NZL6 768 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 MARK3P27448 753 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 ITPK1Q13572 414 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 PTPAQ15257 358 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 PRPF38AQ8NAV1 312 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 COG1Q8WTW3 980 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 UBE2Q2LH0YL09 131 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 SART1O43290 800 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 FTLP02792 175 aaPredicted RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 MT-ND3P03897 115 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 CA4P22748 312 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 INTS2Q9H0H0 1204 aaKnown RBP11.19□□□□□ -0.62
CTC1-202ENST00000449476 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
CTC1-202ENST00000449476 FRMPD1Q5SYB0 1578 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 MYMKA6NI61 221 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 STXBP3O00186 592 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 EYA4O95677 639 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 BAG2O95816 211 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 SESN3P58005 492 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms