RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ISM2Q6H9L7 571 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 FAM200AQ8TCP9 573 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 KAT2BQ92831 832 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 DRC1Q96MC2 740 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 SH2D3AQ9BRG2 576 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 C17orf75Q9HAS0 396 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 ATP6V0A4Q9HBG4 840 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 SPC25Q9HBM1 224 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 XPNPEP1Q9NQW7 623 aa21.36■■□□□ 1.01
RPS28-202ENST00000449223 IGKV6-21A0A0C4DH24 114 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 RSPH10B2B2RC85 870 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 HAS3O00219 553 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 HIP1RO75146 1068 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 RSPH10BP0C881 870 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 MARK3P27448 753 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 PURAQ00577 322 aaKnown RBP21.35■■□□□ 1.01
RPS28-202ENST00000449223 MTERF2Q49AM1 385 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 ZNF484Q5JVG2 852 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 FAM26FQ5R3K3 315 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 KIAA0895Q8NCT3 520 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 KLHDC9Q8NEP7 349 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 SLC7A3Q8WY07 619 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 XPNPEP3Q9NQH7 507 aa21.35■■□□□ 1.01
RPS28-202ENST00000449223 PPP1R3GB7ZBB8 358 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 MAFO75444 373 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 FAM13AO94988 1023 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 C6orf222P0C671 652 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 ERCC5P28715 1186 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 ZNF165P49910 485 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 CACNB1Q02641 598 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 HERC4Q5GLZ8 1057 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 TRMT1LQ7Z2T5 733 aaKnown RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 KIFAP3Q92845 792 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 FIZ1Q96SL8 496 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 HMX1Q9NP08 348 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 GDAQ9Y2T3 454 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 MAPTP10636 758 aaKnown RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 POLGP54098 1239 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 EMC2Q15006 297 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 CCSAPQ6IQ19 270 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 ADSSL1Q8N142 457 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 KCNN1Q92952 543 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 JPH2Q9BR39 696 aaPredicted RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 LARSQ9P2J5 1176 aaKnown RBP21.34■■□□□ 1.01
RPS28-202ENST00000449223 TRPC6Q9Y210 931 aa21.34■■□□□ 1.01
RPS28-202ENST00000449223 KAT6AQ92794 2004 aa21.33■■□□□ 1.01
RPS28-202ENST00000449223 MYADML2A6NDP7 307 aa21.33■■□□□ 1
RPS28-202ENST00000449223 PLS3P13797 630 aa21.33■■□□□ 1
RPS28-202ENST00000449223 CD44P16070 742 aaKnown RBP21.33■■□□□ 1
RPS28-202ENST00000449223 BEX3Q00994 111 aa21.33■■□□□ 1
RPS28-202ENST00000449223 LHX8Q68G74 356 aa21.33■■□□□ 1
RPS28-202ENST00000449223 SFR1Q86XK3 245 aa21.33■■□□□ 1
RPS28-202ENST00000449223 GUF1Q8N442 669 aaKnown RBP21.33■■□□□ 1
RPS28-202ENST00000449223 ZEB2O60315 1214 aa21.32■■□□□ 1
RPS28-202ENST00000449223 PGK1P00558 417 aa21.32■■□□□ 1
RPS28-202ENST00000449223 INSRRP14616 1297 aa21.32■■□□□ 1
RPS28-202ENST00000449223 PRCPP42785 496 aa21.32■■□□□ 1
RPS28-202ENST00000449223 TBC1D8BQ0IIM8 1120 aa21.32■■□□□ 1
RPS28-202ENST00000449223 IQCB1Q15051 598 aa21.32■■□□□ 1
RPS28-202ENST00000449223 GNASQ5JWF2 1037 aa21.32■■□□□ 1
RPS28-202ENST00000449223 FOXR2Q6PJQ5 311 aa21.32■■□□□ 1
RPS28-202ENST00000449223 EPM2AIP1Q7L775 607 aaPredicted RBP21.32■■□□□ 1
RPS28-202ENST00000449223 SMYD4Q8IYR2 804 aaPredicted RBP21.32■■□□□ 1
RPS28-202ENST00000449223 SLC17A8Q8NDX2 589 aa21.32■■□□□ 1
RPS28-202ENST00000449223 NTPCRQ9BSD7 190 aaKnown RBP21.32■■□□□ 1
RPS28-202ENST00000449223 RBSNQ9H1K0 784 aa21.32■■□□□ 1
RPS28-202ENST00000449223 ST6GALNAC4Q9H4F1 302 aa21.32■■□□□ 1
RPS28-202ENST00000449223 IKBKBO14920 756 aa21.31■■□□□ 1
RPS28-202ENST00000449223 C22orf31O95567 290 aa21.31■■□□□ 1
RPS28-202ENST00000449223 HOXC8P31273 242 aa21.31■■□□□ 1
RPS28-202ENST00000449223 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
RPS28-202ENST00000449223 STIM1Q13586 685 aa21.31■■□□□ 1
RPS28-202ENST00000449223 BMT2Q1RMZ1 405 aa21.31■■□□□ 1
RPS28-202ENST00000449223 CTU1Q7Z7A3 348 aaKnown RBP21.31■■□□□ 1
RPS28-202ENST00000449223 SPIRE2Q8WWL2 714 aa21.31■■□□□ 1
RPS28-202ENST00000449223 HPS3Q969F9 1004 aa21.31■■□□□ 1
RPS28-202ENST00000449223 DHTKD1Q96HY7 919 aaPredicted RBP21.31■■□□□ 1
RPS28-202ENST00000449223 STRA6Q9BX79 667 aa21.31■■□□□ 1
RPS28-202ENST00000449223 CBX8Q9HC52 389 aa21.31■■□□□ 1
RPS28-202ENST00000449223 SLC39A2Q9NP94 309 aa21.31■■□□□ 1
RPS28-202ENST00000449223 KCNG1Q9UIX4 513 aa21.31■■□□□ 1
RPS28-202ENST00000449223 NRCAMQ92823 1304 aa21.3■■□□□ 1
RPS28-202ENST00000449223 EIF3DO15371 548 aaKnown RBP eCLIP21.3■■□□□ 1
RPS28-202ENST00000449223 MAGEB2O15479 319 aa21.3■■□□□ 1
RPS28-202ENST00000449223 ARL2P36404 184 aa21.3■■□□□ 1
RPS28-202ENST00000449223 PSEN2P49810 448 aa21.3■■□□□ 1
RPS28-202ENST00000449223 MFSD10Q14728 455 aa21.3■■□□□ 1
RPS28-202ENST00000449223 KIAA0753Q2KHM9 967 aa21.3■■□□□ 1
RPS28-202ENST00000449223 ODR4Q5SWX8 454 aa21.3■■□□□ 1
RPS28-202ENST00000449223 FAM102BQ5T8I3 360 aa21.3■■□□□ 1
RPS28-202ENST00000449223 MYCT1Q8N699 235 aa21.3■■□□□ 1
RPS28-202ENST00000449223 LINC01465Q8N7H1 131 aa21.3■■□□□ 1
RPS28-202ENST00000449223 PCSK9Q8NBP7 692 aaKnown RBP21.3■■□□□ 1
RPS28-202ENST00000449223 MTG1Q9BT17 334 aaPredicted RBP21.3■■□□□ 1
RPS28-202ENST00000449223 GPRC5CQ9NQ84 441 aa21.3■■□□□ 1
RPS28-202ENST00000449223 PAK6Q9NQU5 681 aaPredicted RBP21.3■■□□□ 1
RPS28-202ENST00000449223 UBE4BO95155 1302 aa21.3■■□□□ 1
RPS28-202ENST00000449223 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms