RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 NLRC5Q86WI3 1866 aa15.06■□□□□ 0
HMGB3-204ENST00000448905 ESYT2A0FGR8 921 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 PRPF3O43395 683 aaKnown RBP15.05■□□□□ -0
HMGB3-204ENST00000448905 LAG3P18627 525 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 CDC27P30260 824 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 CDC42EP1Q00587 391 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ -0
HMGB3-204ENST00000448905 PRR16Q569H4 304 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 ADGRD2Q7Z7M1 963 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 SMRP1Q8NCR6 262 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 PHF7Q9BWX1 381 aaPredicted RBP15.05■□□□□ -0
HMGB3-204ENST00000448905 NGRNQ9NPE2 291 aaKnown RBP15.05■□□□□ -0
HMGB3-204ENST00000448905 FAM217BQ9NTX9 383 aaPredicted RBP15.05■□□□□ -0
HMGB3-204ENST00000448905 GABBR1Q9UBS5 961 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 LZTS1Q9Y250 596 aa15.05■□□□□ -0
HMGB3-204ENST00000448905 IGLV3-22A0A075B6J6 115 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 WDR64B1ANS9 1081 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 PER2O15055 1255 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 MGEA5O60502 916 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 CDC45O75419 566 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 C22orf31O95567 290 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 ATP4AP20648 1035 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 GATMP50440 423 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 EFCAB12Q6NXP0 572 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 HFE2Q6ZVN8 426 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
HMGB3-204ENST00000448905 BMP8AQ7Z5Y6 402 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 RASEFQ8IZ41 740 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 CCDC148Q8NFR7 591 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 TMEM40Q8WWA1 233 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 OSMRQ99650 979 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 PRRX2Q99811 253 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 AKT3Q9Y243 479 aa15.04■□□□□ -0
HMGB3-204ENST00000448905 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 LOC730098B7Z3J9 87 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 GPR32O75388 356 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 VTNP04004 478 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 EIF4BP23588 611 aaKnown RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 CIITAP33076 1130 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 PPM1AP35813 382 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 USP11P51784 963 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 NLRP11P59045 1033 aaKnown RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 PLCB3Q01970 1234 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 BLOC1S2Q6QNY1 142 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 TRIM67Q6ZTA4 783 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 Q6ZUG5 572 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 COLGALT1Q8NBJ5 622 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 CRYGNQ8WXF5 182 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 MRPS27Q92552 414 aaKnown RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 PBXIP1Q96AQ6 731 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 RPGRIP1Q96KN7 1286 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 FBXL18Q96ME1 805 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 SCLT1Q96NL6 688 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 PPP1R16BQ96T49 567 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 BARX2Q9UMQ3 279 aaPredicted RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
HMGB3-204ENST00000448905 ATG2AQ2TAZ0 1938 aa15.03■□□□□ -0
HMGB3-204ENST00000448905 EOMESO95936 686 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 FGFR1P11362 822 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 PSMA5P28066 241 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 SFNP31947 248 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 DNM2P50570 870 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 ERVFC1P60507 584 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 APOBRQ0VD83 1088 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 DUSP6Q16828 381 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 TMC7Q7Z402 723 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 FAM228AQ86W67 206 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 SUGP1Q8IWZ8 645 aaKnown RBP15.02■□□□□ -0
HMGB3-204ENST00000448905 TMEM87AQ8NBN3 555 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 BRF1Q92994 677 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 ZNF558Q96NG5 402 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 RIT2Q99578 217 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 C22orf23Q9BZE7 217 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 ENTPD7Q9NQZ7 604 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 DISC1Q9NRI5 854 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 DACT1Q9NYF0 836 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 SPG21Q9NZD8 308 aa15.02■□□□□ -0
HMGB3-204ENST00000448905 MYO7AQ13402 2215 aa15.02□□□□□ -0.01
HMGB3-204ENST00000448905 CARNS1A5YM72 827 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 TMEM221A6NGB7 291 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 M0R296 226 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 HOXB8P17481 243 aaPredicted RBP15.01□□□□□ -0.01
HMGB3-204ENST00000448905 ALDH7A1P49419 539 aaKnown RBP15.01□□□□□ -0.01
HMGB3-204ENST00000448905 NLRP5P59047 1200 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 ZXDAP98168 799 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 NHLH1Q02575 133 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 DSC3Q14574 896 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 CBX2Q14781 532 aaPredicted RBP15.01□□□□□ -0.01
HMGB3-204ENST00000448905 KCNT2Q6UVM3 1135 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 TMEM184AQ6ZMB5 413 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 RNF169Q8NCN4 708 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
HMGB3-204ENST00000448905 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 CWH43Q9H720 699 aa15.01□□□□□ -0.01
HMGB3-204ENST00000448905 GAS7O60861 476 aa15□□□□□ -0.01
HMGB3-204ENST00000448905 OATP04181 439 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms