RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RIC8AQ9NPQ8 531 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 NR2E1Q9Y466 385 aa20.5■□□□□ 0.87
CHCHD3-203ENST00000448878 SMCO2A6NFE2 343 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 HIDE1A8MVS5 230 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 CCNE2O96020 404 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 PDGFBP01127 241 aaPredicted RBP20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 PBX3P40426 434 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 CES5AQ6NT32 575 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 SYCE2Q6PIF2 218 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 KCNT2Q6UVM3 1135 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 ABHD15Q6UXT9 468 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 FAM228AQ86W67 206 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 PLA2G4DQ86XP0 818 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 CCDC60Q8IWA6 550 aaPredicted RBP20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 RIPOR3Q96MK2 946 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 TCEAL9Q9UHQ7 104 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 LZTS1Q9Y250 596 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 KMT2EQ8IZD2 1858 aa20.49■□□□□ 0.87
CHCHD3-203ENST00000448878 COL1A2P08123 1366 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 IGKV6D-21A0A0A0MT36 114 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 MEIS1O00470 390 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 ZSCAN20P17040 1043 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 PLCB3Q01970 1234 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 COL9A3Q14050 684 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 TMEM184AQ6ZMB5 413 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 FAM43BQ6ZT52 329 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 KREMEN2Q8NCW0 462 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 ZNF558Q96NG5 402 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 TMEM117Q9H0C3 514 aa20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 NGRNQ9NPE2 291 aaKnown RBP20.48■□□□□ 0.87
CHCHD3-203ENST00000448878 SLC27A2O14975 620 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 HOXA2O43364 376 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 HOXB8P17481 243 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 TPRNQ4KMQ1 711 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 TYW1BQ6NUM6 668 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 CASP10Q92851 521 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 CASD1Q96PB1 797 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 CDH22Q9UJ99 828 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 AKT3Q9Y243 479 aa20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-203ENST00000448878 PPM1AP35813 382 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 FAM189BP81408 668 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 KCNC3Q14003 757 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 LRRC55Q6ZSA7 311 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 RASGRP4Q8TDF6 673 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 ZNF668Q96K58 619 aaPredicted RBP20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 SPG21Q9NZD8 308 aa20.46■□□□□ 0.87
CHCHD3-203ENST00000448878 EVPLQ92817 2033 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 GPR32O75388 356 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 C22orf31O95567 290 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 ATP4AP20648 1035 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 SREBF1P36956 1147 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 CLCN3P51790 818 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 NLRP11P59045 1033 aaKnown RBP20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 MTMR3Q13615 1198 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 SMC1AQ14683 1233 aaKnown RBP20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 PPP1R18Q6NYC8 613 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 LRRC43Q8N309 656 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 BBXQ8WY36 941 aaPredicted RBP20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 SCLT1Q96NL6 688 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 ZNF577Q9BSK1 485 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 SAMM50Q9Y512 469 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 CNTNAP5Q8WYK1 1306 aa20.45■□□□□ 0.86
CHCHD3-203ENST00000448878 ZBTB42B2RXF5 422 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 IPO5O00410 1097 aaKnown RBP20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 WEE2P0C1S8 567 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 DSC3Q14574 896 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 BMS1Q14692 1282 aaKnown RBP20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 RTN1Q16799 776 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 EFCAB12Q6NXP0 572 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 NIPA1Q7RTP0 329 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 MAP7D2Q96T17 732 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 POMKQ9H5K3 350 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 SORCS3Q9UPU3 1222 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 HCFC2Q9Y5Z7 792 aa20.44■□□□□ 0.86
CHCHD3-203ENST00000448878 C2CD4DB7Z1M9 353 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 NT5C1B-RDH14C9J2C7 533 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 GALR2O43603 387 aaPredicted RBP20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 BRD1O95696 1058 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 PSAPP07602 524 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 TMOD1P28289 359 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.862e-6■■■□□ 16.2
CHCHD3-203ENST00000448878 SGMS1Q86VZ5 419 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 ECHDC2Q86YB7 292 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 UBALD2Q8IYN6 164 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 NECTIN4Q96NY8 510 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 ADAM7Q9H2U9 754 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 MFSD1Q9H3U5 465 aa20.43■□□□□ 0.86
CHCHD3-203ENST00000448878 GABBR1Q9UBS5 961 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms