RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 LENG1Q96BZ8 264 aaPredicted RBP16.65■□□□□ 0.26
RAB5B-202ENST00000448789 SRRTQ9BXP5 876 aaKnown RBP16.65■□□□□ 0.26
RAB5B-202ENST00000448789 SEL1LQ9UBV2 794 aa16.65■□□□□ 0.26
RAB5B-202ENST00000448789 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 NKRFO15226 690 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB5B-202ENST00000448789 SERPINC1P01008 464 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
RAB5B-202ENST00000448789 LAMC2Q13753 1193 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 TARBP2Q15633 366 aaKnown RBP16.64■□□□□ 0.25
RAB5B-202ENST00000448789 BMT2Q1RMZ1 405 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 FAM102BQ5T8I3 360 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 LRRC55Q6ZSA7 311 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 FAM178BQ8IXR5 827 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 GLG1Q92896 1179 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
RAB5B-202ENST00000448789 NIFKQ9BYG3 293 aaKnown RBP16.64■□□□□ 0.25
RAB5B-202ENST00000448789 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.25
RAB5B-202ENST00000448789 KCNJ18B7U540 433 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 TRPA1O75762 1119 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 PPP1R37O75864 691 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 PLS3P13797 630 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 CDC25BP30305 580 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 UBASH3AP57075 661 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 KCNJ12Q14500 433 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 KRT31Q15323 416 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 ZNF720Q7Z2F6 126 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 ZNF507Q8TCN5 953 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 STRA6Q9BX79 667 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 THAP9Q9H5L6 903 aa16.63■□□□□ 0.25
RAB5B-202ENST00000448789 MYH9P35579 1960 aaKnown RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 DGAT1O75907 488 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 LGALS2P05162 132 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 FLT3LGP49771 235 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 PRKCZQ05513 592 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 EMC2Q15006 297 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 PLPPR4Q7Z2D5 763 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 DHX33Q9H6R0 707 aaKnown RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 TAB2Q9NYJ8 693 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 LIMA1Q9UHB6 759 aaKnown RBP16.62■□□□□ 0.25
RAB5B-202ENST00000448789 NRBP1Q9UHY1 535 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
RAB5B-202ENST00000448789 ZBTB42B2RXF5 422 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 K7ENM7 598 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 EIF3DO15371 548 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAB5B-202ENST00000448789 PEX3P56589 373 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 SP3Q02447 781 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.61■□□□□ 0.25
RAB5B-202ENST00000448789 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 TRIB2Q92519 343 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 KIFC3Q9BVG8 833 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 POLR3FQ9H1D9 316 aaPredicted RBP16.61■□□□□ 0.25
RAB5B-202ENST00000448789 NRBP2Q9NSY0 501 aa16.61■□□□□ 0.25
RAB5B-202ENST00000448789 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
RAB5B-202ENST00000448789 GNEQ9Y223 722 aaKnown RBP16.61■□□□□ 0.25
RAB5B-202ENST00000448789 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 SLC16A4O15374 487 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 MMP3P08254 477 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 HOXD8P13378 290 aaPredicted RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 MAP2K2P36507 400 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 NPTX2P47972 431 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 POLGP54098 1239 aaPredicted RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 MCPH1Q8NEM0 835 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TRAPPC12Q8WVT3 735 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TMEM143Q96AN5 459 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 FAM167AQ96KS9 214 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TSG101Q99816 390 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 RNPEPQ9H4A4 650 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TEX33O43247 280 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 KIF20AO95235 890 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 XRCC5P13010 732 aaKnown RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
RAB5B-202ENST00000448789 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 SPAG1Q07617 926 aa16.6■□□□□ 0.25
RAB5B-202ENST00000448789 TRIM32Q13049 653 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms