RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 CNKSR3Q6P9H4 555 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 PIGOQ8TEQ8 1089 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 HERVK_113Q902F9 699 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 SEPT8Q92599 483 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 SCLT1Q96NL6 688 aa15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
GTF3C3-206ENST00000448539 ZBTB39O15060 712 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 GAS2O43903 313 aaKnown RBP15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 MAFO75444 373 aaPredicted RBP15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 VTNP04004 478 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 GHRP10912 638 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 MBTPS1Q14703 1052 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 Q7L0L9 218 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 AK8Q96MA6 479 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 USP28Q96RU2 1077 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.09
GTF3C3-206ENST00000448539 A0A087WWV3 80 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 ARHGEF35A5YM69 484 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 BAIAP3O94812 1187 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 MARCKSP29966 332 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 CDC25AP30304 524 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 KCNJ6P48051 423 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 CDC42EP1Q00587 391 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 PKP1Q13835 747 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 IKBKEQ14164 716 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 GPNMBQ14956 572 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 STK38Q15208 465 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 FOXD4L6Q3SYB3 417 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 FOXD4L3Q6VB84 417 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 TSHZ1Q6ZSZ6 1077 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 USP38Q8NB14 1042 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 DBF4BQ8NFT6 615 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 TCP11Q8WWU5 503 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 APBB2Q92870 758 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 CEP89Q96ST8 783 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 MTRQ99707 1265 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 BMP2KQ9NSY1 1161 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 SUCLA2Q9P2R7 463 aaPredicted RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 DBR1Q9UK59 544 aaKnown RBP15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 KIAA1024Q9UPX6 916 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 SLC4A7Q9Y6M7 1214 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 SQORQ9Y6N5 450 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 KDM3AQ9Y4C1 1321 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
GTF3C3-206ENST00000448539 IGKV6-21A0A0C4DH24 114 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 ABHD14A-ACY1A0A1B0GW23 586 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 EFCAB14O75071 495 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 DGAT1O75907 488 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 UBA7P41226 1012 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 RARRES1P49788 294 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 CRYBB1P53674 252 aaPredicted RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 EMC2Q15006 297 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 PTPAQ15257 358 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 KIZQ2M2Z5 673 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 PLEKHG4Q58EX7 1191 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 FBXO47Q5MNV8 452 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 LINC01465Q8N7H1 131 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 RASSF8Q8NHQ8 419 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 NLRP7Q8WX94 980 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 IFIH1Q9BYX4 1025 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 DHX33Q9H6R0 707 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 ATP6V0A4Q9HBG4 840 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 DDX19AQ9NUU7 478 aaKnown RBP15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 DNM3Q9UQ16 869 aa15.62■□□□□ 0.09
GTF3C3-206ENST00000448539 WDR81Q562E7 1941 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 USO1O60763 962 aaKnown RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 BRD1O95696 1058 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 PAK2Q13177 524 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 LPIN1Q14693 890 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 SLC39A14Q15043 492 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 ATL3Q6DD88 541 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 CABP7Q86V35 215 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 RHPN2Q8IUC4 686 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 PSPC1Q8WXF1 523 aaKnown RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 TMEM143Q96AN5 459 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 VWCEQ96DN2 955 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 CALML4Q96GE6 196 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 OSMRQ99650 979 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 CXXC1Q9P0U4 656 aaPredicted RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 CFAP45Q9UL16 551 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 ATP6V1DQ9Y5K8 247 aa15.61■□□□□ 0.09
GTF3C3-206ENST00000448539 SLC26A4O43511 780 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 GPR32O75388 356 aa15.6■□□□□ 0.09
GTF3C3-206ENST00000448539 RPS6KA5O75582 802 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms