RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 GNA11P29992 359 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 GTF2F1P35269 517 aaKnown RBP eCLIP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 SARSP49591 514 aaKnown RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 AKAP17AQ02040 695 aaKnown RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 DLX2Q07687 328 aaPredicted RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 CAMK1Q14012 370 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 METTL13Q8N6R0 699 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 KLHL23Q8NBE8 558 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 FBXL18Q96ME1 805 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
VSTM1-206ENST00000447872 ADAM2Q99965 735 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 CDHR5Q9HBB8 845 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 ERVK-5Q9HDB9 667 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 C1orf112Q9NSG2 853 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 LIMCH1Q9UPQ0 1083 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 COL1A2P08123 1366 aa11.75□□□□□ -0.53
VSTM1-206ENST00000447872 CACNA1BQ00975 2339 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 IGLV3-22A0A075B6J6 115 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 PPFIA3O75145 1194 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 PSAPP07602 524 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 DNAJB1P25685 340 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 NDUFV1P49821 464 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 CRYBB1P53674 252 aaPredicted RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 SETQ01105 290 aaPredicted RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 ADAM15Q13444 863 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 SMAD4Q13485 552 aaKnown RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 KIZQ2M2Z5 673 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 SPOUT1Q5T280 376 aaKnown RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 ZNF746Q6NUN9 644 aaPredicted RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 SLC24A5Q71RS6 500 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 REXO1Q8N1G1 1221 aaKnown RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 AAASQ9NRG9 546 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 ST3GAL5Q9UNP4 418 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 NOC2LQ9Y3T9 749 aaKnown RBP11.74□□□□□ -0.53
VSTM1-206ENST00000447872 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 PCDHA10Q9Y5I2 948 aa11.74□□□□□ -0.53
VSTM1-206ENST00000447872 ZBTB42B2RXF5 422 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 MAGEB2O15479 319 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 LINC01565O15544 149 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 PRPF3O43395 683 aaKnown RBP11.73□□□□□ -0.53
VSTM1-206ENST00000447872 MBTPS2O43462 519 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 CPA1P15085 419 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 GATMP50440 423 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 PRR16Q569H4 304 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 Q6ZUG5 572 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 TRMT1LQ7Z2T5 733 aaKnown RBP11.73□□□□□ -0.53
VSTM1-206ENST00000447872 PKD1L2Q7Z442 2459 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 SMAP1Q8IYB5 467 aaPredicted RBP11.73□□□□□ -0.53
VSTM1-206ENST00000447872 EFHBQ8N7U6 833 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 BRF1Q92994 677 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
VSTM1-206ENST00000447872 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 PDRG1Q9NUG6 133 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 SAMM50Q9Y512 469 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 MAFBQ9Y5Q3 323 aaPredicted RBP11.73□□□□□ -0.53
VSTM1-206ENST00000447872 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
VSTM1-206ENST00000447872 SIP14410 1827 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 C9IYK1 514 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 MGEA5O60502 916 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 TBX10O75333 385 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 GPR32O75388 356 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 C22orf31O95567 290 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 ATP4AP20648 1035 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 TMOD1P28289 359 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 IRS1P35568 1242 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 NRIP1P48552 1158 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 FAM189BP81408 668 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 UBE3AQ05086 875 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 PKN1Q16512 942 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
VSTM1-206ENST00000447872 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
VSTM1-206ENST00000447872 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 TMEM40Q8WWA1 233 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 FOXD4L4Q8WXT5 416 aaPredicted RBP11.72□□□□□ -0.53
VSTM1-206ENST00000447872 FAM167AQ96KS9 214 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 OSMRQ99650 979 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 TLE6Q9H808 572 aa11.72□□□□□ -0.53
VSTM1-206ENST00000447872 ATP6V0A4Q9HBG4 840 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms