RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 GRIN2CQ14957 1233 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 TMEM266Q2M3C6 531 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 PPP2R2DQ66LE6 453 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 C4orf19Q8IY42 314 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 USP38Q8NB14 1042 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 CEP89Q96ST8 783 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 CDX2Q99626 313 aaPredicted RBP27.99■■■□□ 2.07
UFD1-204ENST00000447868 OSMRQ99650 979 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 ZSWIM4Q9H7M6 989 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 CYP26B1Q9NR63 512 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 PCDHB6Q9Y5E3 794 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 SQORQ9Y6N5 450 aa27.99■■■□□ 2.07
UFD1-204ENST00000447868 GJB5O95377 273 aa27.98■■■□□ 2.07
UFD1-204ENST00000447868 YWHABP31946 246 aaKnown RBP27.98■■■□□ 2.07
UFD1-204ENST00000447868 TECP42680 631 aa27.98■■■□□ 2.07
UFD1-204ENST00000447868 ZNF579Q8NAF0 562 aaKnown RBP27.98■■■□□ 2.07
UFD1-204ENST00000447868 TMEM40Q8WWA1 233 aa27.98■■■□□ 2.07
UFD1-204ENST00000447868 ZNF668Q96K58 619 aaPredicted RBP27.98■■■□□ 2.07
UFD1-204ENST00000447868 CEP170P1Q96L14 293 aa27.98■■■□□ 2.07
UFD1-204ENST00000447868 PADI3Q9ULW8 664 aa27.98■■■□□ 2.07
UFD1-204ENST00000447868 ZBTB39O15060 712 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 GPR32O75388 356 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 UPP2O95045 317 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 CRYBB1P53674 252 aaPredicted RBP27.97■■■□□ 2.07
UFD1-204ENST00000447868 NLRP11P59045 1033 aaKnown RBP27.97■■■□□ 2.07
UFD1-204ENST00000447868 DRP2Q13474 957 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 MYLIPQ8WY64 445 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 HSD17B14Q9BPX1 270 aa27.97■■■□□ 2.07
UFD1-204ENST00000447868 NOC2LQ9Y3T9 749 aaKnown RBP27.97■■■□□ 2.07
UFD1-204ENST00000447868 K7ELQ4 463 aaPredicted RBP27.96■■■□□ 2.07
UFD1-204ENST00000447868 RPS6KA5O75582 802 aa27.96■■■□□ 2.07
UFD1-204ENST00000447868 NFX1Q12986 1120 aaKnown RBP27.96■■■□□ 2.07
UFD1-204ENST00000447868 OTUD6AQ7L8S5 288 aa27.96■■■□□ 2.07
UFD1-204ENST00000447868 C4orf32Q8N8J7 132 aa27.96■■■□□ 2.07
UFD1-204ENST00000447868 NEK9Q8TD19 979 aa27.96■■■□□ 2.07
UFD1-204ENST00000447868 FOXD4L1Q9NU39 408 aa27.96■■■□□ 2.07
UFD1-204ENST00000447868 LCHNA4D1U4 455 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 ENPP3O14638 875 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 MAFO75444 373 aaPredicted RBP27.95■■■□□ 2.06
UFD1-204ENST00000447868 ARHGEF15O94989 841 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 XKR9Q5GH70 373 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 SCLT1Q96NL6 688 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 RAD9AQ99638 391 aa27.95■■■□□ 2.06
UFD1-204ENST00000447868 BMP2KQ9NSY1 1161 aaPredicted RBP27.95■■■□□ 2.06
UFD1-204ENST00000447868 CDH23Q9H251 3354 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 IGKV6-21A0A0C4DH24 114 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 DNM2P50570 870 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 PTGDRQ13258 359 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 TOP1MTQ969P6 601 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 ADAMTS10Q9H324 1103 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 PRDM12Q9H4Q4 367 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 STXBP5LQ9Y2K9 1186 aa27.94■■■□□ 2.06
UFD1-204ENST00000447868 GPC3P51654 580 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 POLGP54098 1239 aaPredicted RBP27.93■■■□□ 2.06
UFD1-204ENST00000447868 RILPL1Q5EBL4 403 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 NLRP7Q8WX94 980 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 LINC01599Q8WXQ3 324 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 SLC7A3Q8WY07 619 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 JPH2Q9BR39 696 aaPredicted RBP27.93■■■□□ 2.06
UFD1-204ENST00000447868 FTHL17Q9BXU8 183 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 TMX1Q9H3N1 280 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 CERS4Q9HA82 394 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 ERVK-5Q9HDB9 667 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 SUCLA2Q9P2R7 463 aaPredicted RBP27.93■■■□□ 2.06
UFD1-204ENST00000447868 ST3GAL5Q9UNP4 418 aa27.93■■■□□ 2.06
UFD1-204ENST00000447868 ARID2Q68CP9 1835 aa27.92■■■□□ 2.06
UFD1-204ENST00000447868 A0A087WWV3 80 aa27.92■■■□□ 2.06
UFD1-204ENST00000447868 VPS37CA5D8V6 355 aaPredicted RBP27.92■■■□□ 2.06
UFD1-204ENST00000447868 TAP1Q03518 808 aa27.92■■■□□ 2.06
UFD1-204ENST00000447868 RTN4RL1Q86UN2 441 aaPredicted RBP27.92■■■□□ 2.06
UFD1-204ENST00000447868 FAM228AQ86W67 206 aa27.92■■■□□ 2.06
UFD1-204ENST00000447868 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.92■■■□□ 2.06
UFD1-204ENST00000447868 GPR182O15218 404 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 MED24O75448 989 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 LYPLA2O95372 231 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 SPATA31C1P0DKV0 1188 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 RFC5P40937 340 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 ODR4Q5SWX8 454 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 CATSPER3Q86XQ3 398 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 RHPN2Q8IUC4 686 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 ZNF710Q8N1W2 664 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 ERMNQ8TAM6 284 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 SNX21Q969T3 373 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 PPME1Q9Y570 386 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 INSL6Q9Y581 213 aa27.91■■■□□ 2.06
UFD1-204ENST00000447868 MYO9BQ13459 2157 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 FOSL2P15408 326 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 PDCP20941 246 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 IBSPP21815 317 aaPredicted RBP27.9■■■□□ 2.06
UFD1-204ENST00000447868 FXR2P51116 673 aaKnown RBP eCLIP27.9■■■□□ 2.06
UFD1-204ENST00000447868 EMC2Q15006 297 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 SPRED2Q7Z698 418 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 PIGOQ8TEQ8 1089 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 TMEM143Q96AN5 459 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 INTS4Q96HW7 963 aaKnown RBP27.9■■■□□ 2.06
UFD1-204ENST00000447868 CCDC43Q96MW1 224 aaKnown RBP27.9■■■□□ 2.06
UFD1-204ENST00000447868 YME1L1Q96TA2 773 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 DHX33Q9H6R0 707 aaKnown RBP27.9■■■□□ 2.06
UFD1-204ENST00000447868 TUFT1Q9NNX1 390 aa27.9■■■□□ 2.06
UFD1-204ENST00000447868 CHD9Q3L8U1 2897 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms