RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MIIPQ5JXC2 388 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 MYLK4Q86YV6 388 aaPredicted RBP20.8■□□□□ 0.92
HMGA1-205ENST00000447654 CSGALNACT2Q8N6G5 542 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 GIMAP8Q8ND71 665 aaPredicted RBP20.8■□□□□ 0.92
HMGA1-205ENST00000447654 TMEM237Q96Q45 408 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 GOPCQ9HD26 462 aa20.8■□□□□ 0.92
HMGA1-205ENST00000447654 G3BP2Q9UN86 482 aaKnown RBP20.8■□□□□ 0.92
HMGA1-205ENST00000447654 PRDX5P30044 214 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 RASSF7Q02833 373 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 DHX9Q08211 1270 aaKnown RBP20.79■□□□□ 0.92
HMGA1-205ENST00000447654 C6orf118Q5T5N4 469 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 SYN2Q92777 582 aaPredicted RBP20.79■□□□□ 0.92
HMGA1-205ENST00000447654 PTPRN2Q92932 1015 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 PPP1R14BQ96C90 147 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 NSUN4Q96CB9 384 aaKnown RBP20.79■□□□□ 0.92
HMGA1-205ENST00000447654 CNOT6LQ96LI5 555 aaKnown RBP20.79■□□□□ 0.92
HMGA1-205ENST00000447654 NEUROG2Q9H2A3 272 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 IRS2Q9Y4H2 1338 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 MYH1P12882 1939 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 MAP3K13O43283 966 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 PEX11AO75192 247 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 UNC5CO95185 931 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 KRT2P35908 639 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 KLK7P49862 253 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 PMS1P54277 932 aaKnown RBP20.79■□□□□ 0.92
HMGA1-205ENST00000447654 NFIXQ14938 502 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 BTNL9Q6UXG8 535 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 TRIM42Q8IWZ5 723 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 OXER1Q8TDS5 423 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 NDNQ99608 321 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 SELENOSQ9BQE4 189 aa20.79■□□□□ 0.92
HMGA1-205ENST00000447654 CCNE1P24864 410 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 RFC5P40937 340 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 MTIF2P46199 727 aaKnown RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 MECOMQ03112 1051 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 MKRN3Q13064 507 aaKnown RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 CCDC178Q5BJE1 867 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 RNF43Q68DV7 783 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 CCDC82Q8N4S0 544 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 STAMQ92783 540 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 DUSP9Q99956 384 aaKnown RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 CNOT7Q9UIV1 285 aaKnown RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 SIK3Q9Y2K2 1263 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 MYH2Q9UKX2 1941 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 TULP1O00294 542 aaPredicted RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 BUB1O43683 1085 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 PRDM1O75626 825 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 PDHA1P08559 390 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 DESP17661 470 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 RFC4P35249 363 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 TRAPPC10P48553 1259 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 SH2D4BQ5SQS7 431 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 KIF2BQ8N4N8 673 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 PRMT1Q99873 361 aaKnown RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
HMGA1-205ENST00000447654 LRMDAQ9H2I8 198 aa20.78■□□□□ 0.92
HMGA1-205ENST00000447654 ALDH1B1P30837 517 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 HIBADHP31937 336 aaKnown RBP20.77■□□□□ 0.92
HMGA1-205ENST00000447654 DEUP1Q05D60 604 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 RPS6KA1Q15418 735 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 ZRSR2Q15696 482 aaKnown RBP20.77■□□□□ 0.92
HMGA1-205ENST00000447654 RNF220Q5VTB9 566 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 TAOK1Q7L7X3 1001 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 ATP8B4Q8TF62 1192 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 PRKAG3Q9UGI9 489 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 ZNF510Q9Y2H8 683 aa20.77■□□□□ 0.92
HMGA1-205ENST00000447654 PGRMC1O00264 195 aaKnown RBP20.76■□□□□ 0.91
HMGA1-205ENST00000447654 WTAPQ15007 396 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 TRAPPC3LQ5T215 181 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 INPP5DQ92835 1189 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 NKX1-2Q9UD57 310 aaPredicted RBP20.76■□□□□ 0.91
HMGA1-205ENST00000447654 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 MAGEA13PA6NCF6 341 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 SKIP12755 728 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 LONP1P36776 959 aaKnown RBP20.76■□□□□ 0.91
HMGA1-205ENST00000447654 SLC1A4P43007 532 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 ACVR2BQ13705 512 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 SEC23AQ15436 765 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 PPP2R5EQ16537 467 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 COBLL1Q53SF7 1204 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
HMGA1-205ENST00000447654 P2RX5Q93086 422 aa20.76■□□□□ 0.91
HMGA1-205ENST00000447654 IQCGQ9H095 443 aaKnown RBP20.76■□□□□ 0.91
HMGA1-205ENST00000447654 RGS16O15492 202 aaPredicted RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 CCDC166P0CW27 439 aa20.75■□□□□ 0.91
HMGA1-205ENST00000447654 ENOX2Q16206 610 aaKnown RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 TNFAIP8L3Q5GJ75 292 aa20.75■□□□□ 0.91
HMGA1-205ENST00000447654 TTC38Q5R3I4 469 aa20.75■□□□□ 0.91
HMGA1-205ENST00000447654 PDXDC1Q6P996 788 aa20.75■□□□□ 0.91
HMGA1-205ENST00000447654 GPR101Q96P66 508 aaPredicted RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 PHF20Q9BVI0 1012 aa20.75■□□□□ 0.91
HMGA1-205ENST00000447654 PABPC3Q9H361 631 aaKnown RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 LARSQ9P2J5 1176 aaKnown RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 UTP11Q9Y3A2 253 aaKnown RBP20.75■□□□□ 0.91
HMGA1-205ENST00000447654 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms