RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MAP7Q14244 749 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 RRP1BQ14684 758 aaKnown RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 C19orf48Q6RUI8 117 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 FLCNQ8NFG4 579 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 MPHOSPH8Q99549 860 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 MYD88Q99836 296 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 METTL22Q9BUU2 404 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 YIPF2Q9BWQ6 316 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 LSM14BQ9BX40 385 aaKnown RBP6.33□□□□□ -1.4
SDCBP-205ENST00000447267 LRRC4CQ9HCJ2 640 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 INCENPQ9NQS7 918 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 CHPF2Q9P2E5 772 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 TIMELESSQ9UNS1 1208 aa6.33□□□□□ -1.4
SDCBP-205ENST00000447267 KIF16BQ96L93 1317 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 SYNRGQ9UMZ2 1314 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 DDTLA6NHG4 134 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 TREHO43280 583 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 CSPG5O95196 566 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 SP100P23497 879 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 RRP1P56182 461 aaKnown RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 SHC2P98077 582 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 HYAL1Q12794 435 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 PTPROQ16827 1216 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 TIGD5Q53EQ6 642 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 DTHD1Q6ZMT9 781 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 VSIG10LQ86VR7 867 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 ZSCAN29Q8IWY8 852 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 KREMEN2Q8NCW0 462 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 GIMAP7Q8NHV1 300 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 FTOQ9C0B1 505 aaKnown RBP eCLIP6.32□□□□□ -1.45e-6■□□□□ 9.5
SDCBP-205ENST00000447267 MFSD1Q9H3U5 465 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 NSUN3Q9H649 340 aaKnown RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 USP40Q9NVE5 1235 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 BTBD7Q9P203 1132 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 NCDNQ9UBB6 729 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 USP18Q9UMW8 372 aa6.32□□□□□ -1.4
SDCBP-205ENST00000447267 HELZ2Q9BYK8 2649 aaKnown RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 COL4A4P53420 1690 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-205ENST00000447267 ZNF462Q96JM2 2506 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 PNMA6FA0A0J9YX94 578 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 HTATSF1O43719 755 aaKnown RBP6.31□□□□□ -1.4
SDCBP-205ENST00000447267 BRD1O95696 1058 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 PRB1P04280 392 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 ACTN1P12814 892 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 CLCN5P51795 746 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 CCNA1P78396 465 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 DEFB103AP81534 67 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 ID3Q02535 119 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 LMNB2Q03252 620 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 HP1BP3Q5SSJ5 553 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-205ENST00000447267 OGFOD3Q6PK18 319 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 ZNF574Q6ZN55 896 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-205ENST00000447267 CRBNQ96SW2 442 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 CTNNA3Q9UI47 895 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 DCTN4Q9UJW0 460 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 RABGAP1Q9Y3P9 1069 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
SDCBP-205ENST00000447267 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 OTOGLQ3ZCN5 2332 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 PTPN13Q12923 2485 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 FRYQ5TBA9 3013 aa6.31□□□□□ -1.4
SDCBP-205ENST00000447267 EIF4E1BA6NMX2 242 aaKnown RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 PAX4O43316 350 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 B4GALT4O60513 344 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 LEFTY1O75610 366 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 ZNF865P0CJ78 1059 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 CYP2C9P11712 490 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 TGM1P22735 817 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 HIBADHP31937 336 aaKnown RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 RGS3P49796 1198 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 BACE1P56817 501 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 ZNF252P-AS1Q0IIN9 211 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 GPM6BQ13491 265 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 KRT24Q2M2I5 525 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 ERICH6Q7L0X2 663 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 ZGPATQ8N5A5 531 aaKnown RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 MAML3Q96JK9 1138 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 FAM84BQ96KN1 310 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 MRIQ9BWK5 157 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 PHF7Q9BWX1 381 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 GPN3Q9UHW5 284 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-205ENST00000447267 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
SDCBP-205ENST00000447267 MAST3O60307 1309 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 SLC30A4O14863 429 aa6.29□□□□□ -1.4
SDCBP-205ENST00000447267 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms