RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 MMTAG2Q9BU76 263 aaKnown RBP24.53■■□□□ 1.52
APOE-204ENST00000446996 CELF4Q9BZC1 486 aaKnown RBP24.53■■□□□ 1.52
APOE-204ENST00000446996 NT5C3AQ9H0P0 336 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 PCDH10Q9P2E7 1040 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 ZDHHC9Q9Y397 364 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 CDY2AQ9Y6F7 541 aa24.53■■□□□ 1.52
APOE-204ENST00000446996 ZBTB39O15060 712 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 DGAT1O75907 488 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 ACTN1P12814 892 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 ANP32AP39687 249 aaKnown RBP24.52■■□□□ 1.52
APOE-204ENST00000446996 NUCB2P80303 420 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 ZNF365Q70YC5 407 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 HERVK_113Q902F9 699 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 FTOQ9C0B1 505 aaKnown RBP eCLIP24.52■■□□□ 1.522e-30■□□□□ 9.7
APOE-204ENST00000446996 MTIF3Q9H2K0 278 aaKnown RBP24.52■■□□□ 1.52
APOE-204ENST00000446996 CFAP45Q9UL16 551 aa24.52■■□□□ 1.52
APOE-204ENST00000446996 PPP6R2O75170 966 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 CTSHP09668 335 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 ACRP10323 421 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 DDIT3P35638 169 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 POLGP54098 1239 aaPredicted RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 SHHQ15465 462 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 RASIP1Q5U651 963 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 FOXD4L5Q5VV16 416 aaPredicted RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 CNKSR3Q6P9H4 555 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 DEFB128Q7Z7B8 93 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 ZNF579Q8NAF0 562 aaKnown RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 PIGOQ8TEQ8 1089 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 TCP11Q8WWU5 503 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 FOXD4L4Q8WXT5 416 aaPredicted RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 CCDC43Q96MW1 224 aaKnown RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 SUGCTQ9HAC7 445 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 FBXO2Q9UK22 296 aaPredicted RBP24.51■■□□□ 1.51
APOE-204ENST00000446996 KIAA1024Q9UPX6 916 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 SIP14410 1827 aa24.51■■□□□ 1.51
APOE-204ENST00000446996 SZT2Q5T011 3432 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 EFCAB14O75071 495 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 BAIAP3O94812 1187 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 UBA7P41226 1012 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 CLCN3P51790 818 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 CEBPZQ03701 1054 aaKnown RBP24.5■■□□□ 1.51
APOE-204ENST00000446996 STK38Q15208 465 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 ECM1Q16610 540 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 PLEKHG4Q58EX7 1191 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 FBXO47Q5MNV8 452 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 POTEGQ6S5H5 508 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 LRRC71Q8N4P6 559 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 APBB2Q92870 758 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 SH2D3AQ9BRG2 576 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 CCSER1Q9C0I3 900 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 DNM3Q9UQ16 869 aa24.5■■□□□ 1.51
APOE-204ENST00000446996 PP2D1A8MPX8 630 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 SPTLC2O15270 562 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 ASAP2O43150 1006 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 GPR32O75388 356 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 MARCKSP29966 332 aaPredicted RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 CDC25AP30304 524 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 CRYBB1P53674 252 aaPredicted RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 MKRN4PQ13434 485 aaPredicted RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 ODR4Q5SWX8 454 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 C9orf50Q5SZB4 431 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 CABP7Q86V35 215 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 KRI1Q8N9T8 703 aaKnown RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 MTRQ99707 1265 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 DDX19AQ9NUU7 478 aaKnown RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 TFIP11Q9UBB9 837 aaKnown RBP24.49■■□□□ 1.51
APOE-204ENST00000446996 AKT3Q9Y243 479 aa24.49■■□□□ 1.51
APOE-204ENST00000446996 EYA4O95677 639 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 EMC2Q15006 297 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 LRIT3Q3SXY7 679 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 TSHZ1Q6ZSZ6 1077 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 SEPT8Q92599 483 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 CALML4Q96GE6 196 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 ATP6V0A4Q9HBG4 840 aa24.48■■□□□ 1.51
APOE-204ENST00000446996 SUCLA2Q9P2R7 463 aaPredicted RBP24.48■■□□□ 1.51
APOE-204ENST00000446996 DAXXQ9UER7 740 aaPredicted RBP24.48■■□□□ 1.51
APOE-204ENST00000446996 ABHD14A-ACY1A0A1B0GW23 586 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 GPC3P51654 580 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 GRIN1Q05586 938 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 TMEM62Q0P6H9 643 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 LPIN1Q14693 890 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 ZNF410Q86VK4 478 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 MCPH1Q8NEM0 835 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 DBF4BQ8NFT6 615 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 KCNG4Q8TDN1 519 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 PNMA5Q96PV4 448 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 CSRNP2Q9H175 543 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 ADAMTS10Q9H324 1103 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 XPNPEP1Q9NQW7 623 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 LAMA3Q16787 3333 aa24.47■■□□□ 1.51
APOE-204ENST00000446996 ARHGEF35A5YM69 484 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 VTNP04004 478 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 NLRP11P59045 1033 aaKnown RBP24.46■■□□□ 1.51
APOE-204ENST00000446996 GRB10Q13322 594 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 IKBKEQ14164 716 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 TMEM119Q4V9L6 283 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 PSPC1Q8WXF1 523 aaKnown RBP24.46■■□□□ 1.51
APOE-204ENST00000446996 CDK5RAP3Q96JB5 506 aa24.46■■□□□ 1.51
APOE-204ENST00000446996 RNPC3Q96LT9 517 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms