RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 OSMRQ99650 979 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
HDAC4-204ENST00000446876 A0A087WWV3 80 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 VPS37CA5D8V6 355 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-204ENST00000446876 EFCAB14O75071 495 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 GPR32O75388 356 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
HDAC4-204ENST00000446876 PTGDRQ13258 359 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 LINC01599Q8WXQ3 324 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 APBB2Q92870 758 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 CEP170P1Q96L14 293 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 MAP7D2Q96T17 732 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 HSD17B14Q9BPX1 270 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 ZNF576Q9H609 170 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 CYP26B1Q9NR63 512 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
HDAC4-204ENST00000446876 NOC2LQ9Y3T9 749 aaKnown RBP16.61■□□□□ 0.25
HDAC4-204ENST00000446876 LCHNA4D1U4 455 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.258e-7■■■■■ 36
HDAC4-204ENST00000446876 AMHP03971 560 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 CA3P07451 260 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
HDAC4-204ENST00000446876 PAK2Q13177 524 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 SNX21Q969T3 373 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.6■□□□□ 0.25
HDAC4-204ENST00000446876 MYO9BQ13459 2157 aa16.6■□□□□ 0.25
HDAC4-204ENST00000446876 TMEM265A0A087WTH1 108 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 IGKV6-21A0A0C4DH24 114 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 TLL1O43897 1013 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-204ENST00000446876 MED24O75448 989 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 UPP2O95045 317 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 GJB5O95377 273 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 SPATA31C1P0DKV0 1188 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 TMOD1P28289 359 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 PPP2R2DQ66LE6 453 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 SPRED2Q7Z698 418 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 NEK9Q8TD19 979 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 ZBED2Q9BTP6 218 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 ADAMTS10Q9H324 1103 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
HDAC4-204ENST00000446876 RPS6KA5O75582 802 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 IBSPP21815 317 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 GPC3P51654 580 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 CRYBB1P53674 252 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 IL17AQ16552 155 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 RILPL1Q5EBL4 403 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 POTEGQ6S5H5 508 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 FAM228AQ86W67 206 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 CATSPER3Q86XQ3 398 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 HSCBQ8IWL3 235 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 PIGOQ8TEQ8 1089 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 MYLIPQ8WY64 445 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 INTS4Q96HW7 963 aaKnown RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 CDX2Q99626 313 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-204ENST00000446876 CERS4Q9HA82 394 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 SQORQ9Y6N5 450 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 TTC3P53804 2025 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 CDH23Q9H251 3354 aa16.58■□□□□ 0.24
HDAC4-204ENST00000446876 COL4A4P53420 1690 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 PP2D1A8MPX8 630 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 ENPP3O14638 875 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 MGEA5O60502 916 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 CSDE1O75534 798 aaKnown RBP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 LYPLA2O95372 231 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 SYT1P21579 422 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 FGFR4P22455 802 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 EMC2Q15006 297 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 RTN4RL1Q86UN2 441 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 KSR1Q8IVT5 923 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 USP38Q8NB14 1042 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 NLRP7Q8WX94 980 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 TMEM143Q96AN5 459 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 PRDM12Q9H4Q4 367 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 SUCLA2Q9P2R7 463 aaPredicted RBP16.57■□□□□ 0.24
HDAC4-204ENST00000446876 ST3GAL5Q9UNP4 418 aa16.57■□□□□ 0.24
HDAC4-204ENST00000446876 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 PDCP20941 246 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 RFC5P40937 340 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
HDAC4-204ENST00000446876 TAP1Q03518 808 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 ECM1Q16610 540 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 SLC7A3Q8WY07 619 aa16.56■□□□□ 0.24
HDAC4-204ENST00000446876 TOP1MTQ969P6 601 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms