RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 KIAA1024Q9UPX6 916 aa20.34■□□□□ 0.85
PHTF1-207ENST00000446739 M0QZ92 97 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 GAS2O43903 313 aaKnown RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 PFKMP08237 780 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 CTSHP09668 335 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 UBA7P41226 1012 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 POLGP54098 1239 aaPredicted RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 MRPS6P82932 125 aaKnown RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 MGAT3Q09327 533 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 CHRDL2Q6WN34 429 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 CABP7Q86V35 215 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 ZNF710Q8N1W2 664 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 ZNF579Q8NAF0 562 aaKnown RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 KCNG4Q8TDN1 519 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 MAP7D2Q96T17 732 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 UBE2OQ9C0C9 1292 aaKnown RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 NT5C3AQ9H0P0 336 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 CSRNP2Q9H175 543 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 DHX33Q9H6R0 707 aaKnown RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 SUGCTQ9HAC7 445 aa20.33■□□□□ 0.85
PHTF1-207ENST00000446739 CIZ1Q9ULV3 898 aaPredicted RBP20.33■□□□□ 0.85
PHTF1-207ENST00000446739 RANBP2P49792 3224 aaKnown RBP20.32■□□□□ 0.84
PHTF1-207ENST00000446739 MYH11P35749 1972 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 DNM2P50570 870 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 CLCN3P51790 818 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 LRRC71Q8N4P6 559 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 CDK5RAP3Q96JB5 506 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 TSHZ2Q9NRE2 1034 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 AKT3Q9Y243 479 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
PHTF1-207ENST00000446739 TRPV2Q9Y5S1 764 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 CDY2AQ9Y6F7 541 aa20.32■□□□□ 0.84
PHTF1-207ENST00000446739 ARHGEF35A5YM69 484 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 DGAT1O75907 488 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 CHRNA1P02708 482 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 KRT85P78386 507 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 ZRSR1Q15695 479 aaKnown RBP20.31■□□□□ 0.84
PHTF1-207ENST00000446739 PSRC1Q6PGN9 363 aaPredicted RBP20.31■□□□□ 0.84
PHTF1-207ENST00000446739 CALML4Q96GE6 196 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 CLIC6Q96NY7 704 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 MTRQ99707 1265 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 CCSER1Q9C0I3 900 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 PRO3102Q9H379 93 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 MICAL3Q7RTP6 2002 aa20.31■□□□□ 0.84
PHTF1-207ENST00000446739 A0A087WWV3 80 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 NBNO60934 754 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 CXCL10P02778 98 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 TXLNAP40222 546 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 EPHB4P54760 987 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 GRB10Q13322 594 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 MBTPS1Q14703 1052 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 GPNMBQ14956 572 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 EMC2Q15006 297 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 TMEM119Q4V9L6 283 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 DEFB128Q7Z7B8 93 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 TCP11Q8WWU5 503 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 CELF4Q9BZC1 486 aaKnown RBP20.3■□□□□ 0.84
PHTF1-207ENST00000446739 ATP6V0A4Q9HBG4 840 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 RCOR1Q9UKL0 485 aa20.3■□□□□ 0.84
PHTF1-207ENST00000446739 CUTAO60888 179 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 EYA4O95677 639 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 VTNP04004 478 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 NCLP19338 710 aaKnown RBP20.29■□□□□ 0.84
PHTF1-207ENST00000446739 CDC42EP1Q00587 391 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 TMEM62Q0P6H9 643 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 MKRN4PQ13434 485 aaPredicted RBP20.29■□□□□ 0.84
PHTF1-207ENST00000446739 VWCEQ96DN2 955 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 SUCLA2Q9P2R7 463 aaPredicted RBP20.29■□□□□ 0.84
PHTF1-207ENST00000446739 SQORQ9Y6N5 450 aa20.29■□□□□ 0.84
PHTF1-207ENST00000446739 E9PMD0 336 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 USO1O60763 962 aaKnown RBP20.28■□□□□ 0.84
PHTF1-207ENST00000446739 FGBP02675 491 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 ACRP10323 421 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 DRP2Q13474 957 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 FBXO47Q5MNV8 452 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 TMEM240Q5SV17 173 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 USP38Q8NB14 1042 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 MCPH1Q8NEM0 835 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 RASSF8Q8NHQ8 419 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 PSPC1Q8WXF1 523 aaKnown RBP20.28■□□□□ 0.84
PHTF1-207ENST00000446739 SYMPKQ92797 1274 aaKnown RBP20.28■□□□□ 0.84
PHTF1-207ENST00000446739 EPSTI1Q96J88 318 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.28■□□□□ 0.84
PHTF1-207ENST00000446739 XPNPEP1Q9NQW7 623 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 BMP2KQ9NSY1 1161 aaPredicted RBP20.28■□□□□ 0.84
PHTF1-207ENST00000446739 CCDC39Q9UFE4 941 aa20.28■□□□□ 0.84
PHTF1-207ENST00000446739 A0A1W2PPC1 479 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 GPR32O75388 356 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 ACTN1P12814 892 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 ME1P48163 572 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 CRYBB1P53674 252 aaPredicted RBP20.27■□□□□ 0.84
PHTF1-207ENST00000446739 KARSQ15046 597 aaKnown RBP20.27■□□□□ 0.84
PHTF1-207ENST00000446739 KIZQ2M2Z5 673 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 PADI6Q6TGC4 694 aa20.27■□□□□ 0.84
PHTF1-207ENST00000446739 TSHZ1Q6ZSZ6 1077 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms