RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 ITGB3BPQ13352 177 aaPredicted RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 GDAP1Q8TB36 358 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 ARHGEF26Q96DR7 871 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 AZI2Q9H6S1 392 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 ENO4A6NNW6 628 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 PLCG2P16885 1265 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 EPC2Q52LR7 807 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 USP40Q9NVE5 1235 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 CCNL1Q9UK58 526 aaPredicted RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 EME2A4GXA9 379 aaPredicted RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 PGRMC1O00264 195 aaKnown RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 H2AFZP0C0S5 128 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 YY1P25490 414 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 INHBEP58166 350 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 MESDQ14696 234 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 H2AFVQ71UI9 128 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 ZNF804AQ7Z570 1209 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 CATSPER3Q86XQ3 398 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 KIAA0825Q8IV33 1275 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 C18orf8Q96DM3 657 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
DDR1-238ENST00000446312 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 L3MBTL1Q9Y468 752 aa13.62□□□□□ -0.23
DDR1-238ENST00000446312 GMNCA6NCL1 334 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 CREB1P16220 341 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 PON1P27169 355 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 DYDC1Q8WWB3 177 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 MTMR4Q9NYA4 1195 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 MYH3P11055 1940 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 GOLGA8IPA6NC78 632 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 GOLGA8JA6NMD2 632 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 LAD1O00515 517 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 DDX3XO00571 662 aaKnown RBP eCLIP13.61□□□□□ -0.236e-7■■■■■ 34.8
DDR1-238ENST00000446312 ACSL3O95573 720 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 ERFP50548 548 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 ADCY2Q08462 1091 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 QRICH1Q2TAL8 776 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 PRUNE1Q86TP1 453 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 TRIM59Q8IWR1 403 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 RPUSD2Q8IZ73 545 aaKnown RBP13.61□□□□□ -0.23
DDR1-238ENST00000446312 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 EPS8L3Q8TE67 593 aaKnown RBP13.61□□□□□ -0.23
DDR1-238ENST00000446312 SLC20A1Q8WUM9 679 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 CUL5Q93034 780 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 SEC16BQ96JE7 1060 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 CUEDC2Q9H467 287 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 TMBIM4Q9HC24 238 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 KCNK9Q9NPC2 374 aa13.61□□□□□ -0.23
DDR1-238ENST00000446312 BCL9LQ86UU0 1499 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PVALEFA0A1B0GWK0 134 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PIAS1O75925 651 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PARD3BQ8TEW8 1205 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 CTNNBL1Q8WYA6 563 aaPredicted RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 CAVIN3Q969G5 261 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 DISP2A7MBM2 1401 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 TCRBV7S2A1N4TA0A589 114 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 CHUKO15111 745 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 CFBP00751 764 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 LDHCP07864 332 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 CCDC174Q6PII3 467 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 FAM196AQ6ZSG2 479 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 IRF2BP2Q7Z5L9 587 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 ZSWIM2Q8NEG5 633 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 TPCN2Q8NHX9 752 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 SLC35G2Q8TBE7 412 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 KRT35Q92764 455 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 KAT5Q92993 513 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PRDM16Q9HAZ2 1276 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 PLCB1Q9NQ66 1216 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 CTTNBP2NLQ9P2B4 639 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 DDX60Q8IY21 1712 aaKnown RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 EVI5O60447 810 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 AFPP02771 609 aaKnown RBP13.6□□□□□ -0.23
DDR1-238ENST00000446312 FIGNQ5HY92 759 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 CACNA2D3Q8IZS8 1091 aa13.6□□□□□ -0.23
DDR1-238ENST00000446312 MYL1P05976 194 aa13.59□□□□□ -0.23
DDR1-238ENST00000446312 CHN1P15882 459 aa13.59□□□□□ -0.23
DDR1-238ENST00000446312 ECHS1P30084 290 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms