RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 KAT6AQ92794 2004 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 RSPH10B2B2RC85 870 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CHMP2AO43633 222 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PLA2G4BP0C869 781 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 RSPH10BP0C881 870 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 NOP14P78316 857 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 GPC5P78333 572 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ILDR1Q86SU0 546 aaPredicted RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 PYROXD1Q8WU10 500 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 NUP85Q9BW27 656 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PSTPIP2Q9H939 334 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 NPHS2Q9NP85 383 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 KDM6BO15054 1643 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 SSU72P8A0A1W2PR75 194 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ATP9AO75110 1047 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 NR3C1P04150 777 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 RPS6KA3P51812 740 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 BPIFB4P59827 614 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 THOC5Q13769 683 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 LRRC59Q96AG4 307 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 MROH5Q6ZUA9 1318 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 SGK1O00141 431 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 USP11P51784 963 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 KDSRQ06136 332 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 ZNF211Q13398 564 aaPredicted RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 FOXP4Q8IVH2 680 aaPredicted RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 CNKSR2Q8WXI2 1034 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 MIF4GDA9UHW6 222 aaKnown RBP8.43□□□□□ -1.06
SMG1-202ENST00000446231 ATP6V0A1Q93050 837 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 RMI1Q9H9A7 625 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 FAM186AA6NE01 2351 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 PLCH2O75038 1416 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CCDC195A0A1B0GUA6 201 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 GUCY1A2P33402 732 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 EPHB1P54762 984 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 MED21Q13503 144 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 WLSQ5T9L3 541 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 CDKAL1Q5VV42 579 aa8.43□□□□□ -1.06
SMG1-202ENST00000446231 KRT75O95678 551 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 KRT81Q14533 505 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 SYDE1Q6ZW31 735 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 RGS9BPQ6ZS82 235 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 MAGEB18Q96M61 343 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 APOBEC2Q9Y235 224 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 TAF6LQ9Y6J9 622 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 LBHD1Q9BQE6 289 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 PTDSS1P48651 473 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 XRCC4Q13426 336 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 TRIM74Q86UV6 250 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 TRIM73Q86UV7 250 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 ERP44Q9BS26 406 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 TLR10Q9BXR5 811 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 SMG5Q9UPR3 1016 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 KDM3AQ9Y4C1 1321 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 LDHBP07195 334 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 FTLP02792 175 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 EPHA10Q5JZY3 1008 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 CCDC138Q96M89 665 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 ATICP31939 592 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 ADD2P35612 726 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 MFAP3P55082 362 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 LPIN2Q92539 896 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 OLFML1Q6UWY5 402 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 GDPD5Q8WTR4 605 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 KIFC3Q9BVG8 833 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 MRPL46Q9H2W6 279 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 RNPEPL1Q9HAU8 725 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 R3HDM2Q9Y2K5 976 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 YTHDC2Q9H6S0 1430 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 IFI35P80217 286 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 TTBK2Q6IQ55 1244 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 RSBN1LQ6PCB5 846 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 UNC13DQ70J99 1090 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 SH3GLB2Q9NR46 395 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 SYNGAP1Q96PV0 1343 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 TBC1D10CQ8IV04 446 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 PAF1Q8N7H5 531 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 C7orf25Q9BPX7 421 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 TRPV6Q9H1D0 765 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 CD109Q6YHK3 1445 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 RABGAP1LQ5R372 815 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 RBBP8NLQ8NC74 664 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 SNF8Q96H20 258 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 HLA-DOAP06340 250 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 NEK2P51955 445 aa8.42□□□□□ -1.06
SMG1-202ENST00000446231 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 ATXN2LQ8WWM7 1075 aaKnown RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 UBE2TQ9NPD8 197 aaPredicted RBP8.42□□□□□ -1.06
SMG1-202ENST00000446231 ABLIM1O14639 778 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 PCP11498 1178 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 ADARP55265 1226 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 A0A1W2PQJ5 194 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 DHX34Q14147 1143 aaKnown RBP8.41□□□□□ -1.06
SMG1-202ENST00000446231 ZCWPW1Q9H0M4 648 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 CC2D2AQ9P2K1 1620 aa8.41□□□□□ -1.06
SMG1-202ENST00000446231 C1orf54Q8WWF1 131 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms