RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MSRAQ9UJ68 235 aa5.99□□□□□ -1.45
HMGB1P48-201ENST00000446155 PLEKHD1A6NEE1 506 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 ALG1L2C9J202 215 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 DDX3XO00571 662 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 KDM1AO60341 852 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 PRPF6O94906 941 aaKnown RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 PDGFRBP09619 1106 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 APEX1P27695 318 aaKnown RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 SARSP49591 514 aaKnown RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 MANFP55145 182 aaKnown RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 EVA1CP58658 441 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 TOP3AQ13472 1001 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 FAM26FQ5R3K3 315 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 TCERG1LQ5VWI1 586 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 TMEM200BQ69YZ2 307 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 IQSEC1Q6DN90 963 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 FRMD7Q6ZUT3 714 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 BCL6BQ8N143 479 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 MBD6Q96DN6 1003 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 SPATA25Q9BR10 227 aa5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 G3BP2Q9UN86 482 aaKnown RBP5.98□□□□□ -1.45
HMGB1P48-201ENST00000446155 H0Y858 1186 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 SLURP1P55000 103 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 CD83Q01151 205 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 FAPQ12884 760 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 VMACQ2NL98 169 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 INAVAQ3KP66 663 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 KIAA1841Q6NSI8 718 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 TRMT10BQ6PF06 316 aaKnown RBP5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 ESPNLQ6ZVH7 1005 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 ZNF761Q86XN6 746 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 ADAMTS17Q8TE56 1095 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 TUBGCP5Q96RT8 1024 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 ORAI2Q96SN7 254 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 MENTQ9BUN1 341 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 KATNBL1Q9H079 304 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 TMPRSS11EQ9UL52 423 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 DENND2AQ9ULE3 1009 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 RIPOR2Q9Y4F9 1068 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 PPP2R3BQ9Y5P8 575 aa5.97□□□□□ -1.45
HMGB1P48-201ENST00000446155 A0A0A6YYJ9 748 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 ETV4P43268 484 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 GUCY2FP51841 1108 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 ADCY2Q08462 1091 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 NFATC3Q12968 1075 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 MTMR1Q13613 665 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 EIF4HQ15056 248 aaKnown RBP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 WDR72Q3MJ13 1102 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 PRAMEF9Q5VWM5 478 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 TIGD7Q6NT04 549 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 UNQ6494/PRO21346Q6UXR6 183 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 LCNL1Q6ZST4 164 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 LYSMD2Q8IV50 215 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 CBARPQ8N350 705 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 CNTD1Q8N815 330 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 TXNDC5Q8NBS9 432 aaKnown RBP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 LMBR1Q8WVP7 490 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 AJUBAQ96IF1 538 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 PSMD1Q99460 953 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 FBXO10Q9UK96 956 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 NOC2LQ9Y3T9 749 aaKnown RBP5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 WASHC2CQ9Y4E1 1318 aa5.96□□□□□ -1.46
HMGB1P48-201ENST00000446155 CCDC194A0A1B0GVG4 234 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 PRSS38A1L453 326 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 TRIM13O60858 407 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 CUTAO60888 179 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 PFKMP08237 780 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 POLD1P28340 1107 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 BCAR1P56945 870 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 GRAMD4Q6IC98 578 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 Q6ZUG5 572 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 SLC41A1Q8IVJ1 513 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 REXO1L1PQ8IX06 675 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 CMIPQ8IY22 773 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 OR5AN1Q8NGI8 311 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 JDP2Q8WYK2 163 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 WNT8AQ9H1J5 351 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 L2HGDHQ9H9P8 463 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 GOLGA2P5Q9HBQ8 144 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 LUC7LQ9NQ29 371 aaKnown RBP5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 HOMER2Q9NSB8 354 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 KCMF1Q9P0J7 381 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 FTSJ1Q9UET6 329 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 ADAM29Q9UKF5 820 aa5.95□□□□□ -1.46
HMGB1P48-201ENST00000446155 LOC102724159A0A0B4J2E5 919 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 A0A0G2JNJ9 132 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 TPD52L2O43399 206 aaKnown RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 NOBOXO60393 691 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 KATNA1O75449 491 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 MAP4K4O95819 1239 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 CSF2RBP32927 897 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 ANTXR2P58335 489 aa5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 FAM50AQ14320 339 aaKnown RBP5.94□□□□□ -1.46
HMGB1P48-201ENST00000446155 PWP2Q15269 919 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms