RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 EXOC3O60645 756 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 UCHL3P15374 230 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 PON1P27169 355 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 BACE1P56817 501 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 HS2ST1Q7LGA3 356 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 TRAPPC11Q7Z392 1133 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 DAW1Q8N136 415 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 SLC35C1Q96A29 364 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 TMCO5BA8MYB1 307 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 LRRN2O75325 713 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 FTCDO95954 541 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 VSNL1P62760 191 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 ZNF720Q7Z2F6 126 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 ZNF280CQ8ND82 737 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 ARFGAP3Q9NP61 516 aa18.41■□□□□ 0.54
LAPTM4B-201ENST00000445593 GOLGA8IPA6NC78 632 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 GOLGA8JA6NMD2 632 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 DHX15O43143 795 aaKnown RBP18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 TACC1O75410 805 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 PTPRAP18433 802 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 WHAMMP3Q1A5X7 153 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 GSPT2Q8IYD1 628 aaKnown RBP18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 GANQ9H2C0 597 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 FRMPD4Q14CM0 1322 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 GAP43P17677 238 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 PTK2Q05397 1052 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 BMS1Q14692 1282 aaKnown RBP18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 PDCD2LQ9BRP1 358 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 BACH1O14867 736 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 PLA2G6O60733 806 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 HNRNPH3P31942 346 aaKnown RBP18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 XKR9Q5GH70 373 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 FRMD5Q7Z6J6 570 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 EHBP1Q8NDI1 1231 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 FIZ1Q96SL8 496 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 GBP3Q9H0R5 595 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 OLFML3Q9NRN5 406 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 AGPAT3Q9NRZ7 376 aa18.4■□□□□ 0.54
LAPTM4B-201ENST00000445593 SLC16A4O15374 487 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 GFPT2O94808 682 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 SERPING1P05155 500 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 PEX3P56589 373 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 FAM84AQ96KN4 292 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 STK24Q9Y6E0 443 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 CCDC169A6NNP5 214 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 CCNE2O96020 404 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 P4HBP07237 508 aaKnown RBP18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 KLRC1P26715 233 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 YWHABP31946 246 aaKnown RBP18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 RIT2Q99578 217 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 ZCCHC17Q9NP64 241 aaKnown RBP18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 USP20Q9Y2K6 914 aa18.39■□□□□ 0.53
LAPTM4B-201ENST00000445593 RPS12P25398 132 aaKnown RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 QARSP47897 775 aaKnown RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 CDK17Q00537 523 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 CBWD6Q4V339 395 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 CBWD3Q5JTY5 395 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 CBWD5Q5RIA9 395 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 DCAF15Q66K64 600 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 GBP6Q6ZN66 633 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 CBWD1Q9BRT8 395 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 PXMP2Q9NR77 195 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 PSMC2P35998 433 aaKnown RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 RARRES1P49788 294 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 MAPK7Q13164 816 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 LONRF2Q1L5Z9 754 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 KLHDC7AQ5VTJ3 777 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 MS4A14Q96JA4 679 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 ABCB6Q9NP58 842 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 MARSP56192 900 aaKnown RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 DLG4P78352 724 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 ZNF571Q7Z3V5 609 aaPredicted RBP18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 TSGA10Q9BZW7 698 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 UBIAD1Q9Y5Z9 338 aa18.38■□□□□ 0.53
LAPTM4B-201ENST00000445593 FZD9O00144 591 aa18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 TRIM58Q8NG06 486 aa18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 ALS2CR12Q96Q35 445 aa18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 PPP1R12BO60237 982 aaPredicted RBP18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 NOP2P46087 812 aaKnown RBP18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 PLA2G4AP47712 749 aa18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
LAPTM4B-201ENST00000445593 SLC26A4O43511 780 aa18.36■□□□□ 0.53
LAPTM4B-201ENST00000445593 PALMO75781 387 aa18.36■□□□□ 0.53
LAPTM4B-201ENST00000445593 DDNO94850 711 aaPredicted RBP18.36■□□□□ 0.53
LAPTM4B-201ENST00000445593 ZRANB2O95218 330 aaKnown RBP eCLIP18.36■□□□□ 0.53
LAPTM4B-201ENST00000445593 NR3C2P08235 984 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms