RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PADI6Q6TGC4 694 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
TCOF1-206ENST00000445265 INTS2Q9H0H0 1204 aaKnown RBP17.95■□□□□ 0.46
TCOF1-206ENST00000445265 PITPNM2Q9BZ72 1349 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 PPP1R37O75864 691 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 CHRNA3P32297 505 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 KAZNQ674X7 775 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 NLRP14Q86W24 1093 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 TFR2Q9UP52 801 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 LRRC10BA6NIK2 292 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 EIF3HO15372 352 aaKnown RBP eCLIP17.94■□□□□ 0.465e-6■■■□□ 14.9
TCOF1-206ENST00000445265 GLG1Q92896 1179 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 ANKZF1Q9H8Y5 726 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 FAM196BA6NMK8 535 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 ICE2Q659A1 982 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 TBC1D16Q8TBP0 767 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 MORC4Q8TE76 937 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
TCOF1-206ENST00000445265 A0A087X0B3 334 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 TNNC2P02585 160 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 MMEP08473 750 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 BMP6P22004 513 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 SEPT9Q9UHD8 586 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-206ENST00000445265 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 STK10O94804 968 aaKnown RBP17.93■□□□□ 0.46
TCOF1-206ENST00000445265 LLGL1Q15334 1064 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 TBC1D10BQ4KMP7 808 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-206ENST00000445265 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
TCOF1-206ENST00000445265 CENPPQ6IPU0 288 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 CTAGE3PQ8IX95 158 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 TCP11Q8WWU5 503 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 LACRTQ9GZZ8 138 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 FBXL5Q9UKA1 691 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 GCLMP48507 274 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 SLC8A3P57103 927 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 CAPN12Q6ZSI9 719 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 FAM205AQ6ZU69 1335 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 POC1B-GALNT4F8VUJ3 575 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 KLRK1P26718 216 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 PEX3P56589 373 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 HERVK_113P62684 666 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 CFAP57Q96MR6 1250 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 NRBP2Q9NSY0 501 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 ANKFY1Q9P2R3 1169 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 AMACRQ9UHK6 382 aa17.93■□□□□ 0.46
TCOF1-206ENST00000445265 RNF8O76064 485 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 TMEM191BP0C7N4 346 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 POLD1P28340 1107 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 PMS2P54278 862 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 GRB10Q13322 594 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 DHX34Q14147 1143 aaKnown RBP17.92■□□□□ 0.46
TCOF1-206ENST00000445265 CYP4F22Q6NT55 531 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 SLC7A3Q8WY07 619 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 KLHL29Q96CT2 875 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 MIS12Q9H081 205 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 NPHP3-ACAD11A0A0J9YXS1 232 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 ZKSCAN8Q15776 578 aaPredicted RBP17.92■□□□□ 0.46
TCOF1-206ENST00000445265 JMJD4Q9H9V9 463 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 LRIG3Q6UXM1 1119 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 DAPK3O43293 454 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 ZRANB2O95218 330 aaKnown RBP eCLIP17.92■□□□□ 0.46
TCOF1-206ENST00000445265 PLEKP08567 350 aaPredicted RBP17.92■□□□□ 0.46
TCOF1-206ENST00000445265 IRAK1P51617 712 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 VAMP7P51809 220 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 HIBCHQ6NVY1 386 aaPredicted RBP17.92■□□□□ 0.46
TCOF1-206ENST00000445265 INTS13Q9NVM9 706 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 SLIT3O75094 1523 aa17.92■□□□□ 0.46
TCOF1-206ENST00000445265 RIC1Q4ADV7 1423 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 FTLP02792 175 aaPredicted RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 KLRC1P26715 233 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 GBP7Q8N8V2 638 aaPredicted RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 CRAMP1Q96RY5 1269 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 CNOT8Q9UFF9 292 aaKnown RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 TCHHQ07283 1943 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 RNPC3Q96LT9 517 aaKnown RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 REEP2Q9BRK0 252 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 TACO1Q9BSH4 297 aaKnown RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 STK33Q9BYT3 514 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 ZNF211Q13398 564 aaPredicted RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 COL5A2P05997 1499 aaPredicted RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 ZNF233A6NK53 670 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 GGPS1O95749 300 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 MDH1P40925 334 aaKnown RBP17.91■□□□□ 0.46
TCOF1-206ENST00000445265 KCTD17Q8N5Z5 321 aa17.91■□□□□ 0.46
TCOF1-206ENST00000445265 P4HBP07237 508 aaKnown RBP17.9■□□□□ 0.46
TCOF1-206ENST00000445265 ASNSP08243 561 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 TRIM49P0CI25 452 aa17.9■□□□□ 0.46
TCOF1-206ENST00000445265 TRIM49CP0CI26 452 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms