RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 RCAN1P53805 252 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 LRRC55Q6ZSA7 311 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 METTL13Q8N6R0 699 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 BBXQ8WY36 941 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 BRF1Q92994 677 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 PHKBQ93100 1093 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 ZNF668Q96K58 619 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 TBC1D22BQ9NU19 505 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 GABBR1Q9UBS5 961 aa16.08■□□□□ 0.16
SMARCAL1-210ENST00000445153 LOC730098B7Z3J9 87 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 PRPF3O43395 683 aaKnown RBP16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 ZNF862O60290 1169 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 CIITAP33076 1130 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 KRT32Q14532 448 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 NTRK3Q16288 839 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 PRR16Q569H4 304 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 SPOUT1Q5T280 376 aaKnown RBP16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 PPP2R3CQ969Q6 453 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 ADAMTS10Q9H324 1103 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 TLE6Q9H808 572 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 TMEM161AQ9NX61 479 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 PCDHB12Q9Y5F1 795 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 PCDHA10Q9Y5I2 948 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 TECTAO75443 2155 aa16.07■□□□□ 0.16
SMARCAL1-210ENST00000445153 FSCN2O14926 492 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 PSAPP07602 524 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 NLRP11P59045 1033 aaKnown RBP16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 NHLH1Q02575 133 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 KCNC3Q14003 757 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 LRRC71Q8N4P6 559 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 EDAQ92838 391 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 GJA10Q969M2 543 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 CASD1Q96PB1 797 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 ATP6V0A4Q9HBG4 840 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 TLR9Q9NR96 1032 aa16.06■□□□□ 0.16
SMARCAL1-210ENST00000445153 MSH4O15457 936 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 PBX3P40426 434 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 UBE3AQ05086 875 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 CBX2Q14781 532 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 UGCGQ16739 394 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 DUSP6Q16828 381 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 EFCAB12Q6NXP0 572 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 SMAP1Q8IYB5 467 aaPredicted RBP16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 ELAC1Q9H777 363 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-210ENST00000445153 TRIOO75962 3097 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 NID2Q14112 1375 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 CCDC196A0A1B0GTZ2 297 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 FGFR4P22455 802 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 HSPA4P34932 840 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 FGD1P98174 961 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 SUSD6Q92537 303 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 SAMM50Q9Y512 469 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 ZNF318Q5VUA4 2279 aa16.04■□□□□ 0.16
SMARCAL1-210ENST00000445153 MAGEB2O15479 319 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 GNA11P29992 359 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 DRP2Q13474 957 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 TRIM67Q6ZTA4 783 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 ECHDC2Q86YB7 292 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 FBXL16Q8N461 479 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 RPGRIP1Q96KN7 1286 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 PHF7Q9BWX1 381 aaPredicted RBP16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 TMEM117Q9H0C3 514 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 DISC1Q9NRI5 854 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 AKT3Q9Y243 479 aa16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 MYH9P35579 1960 aaKnown RBP16.03■□□□□ 0.16
SMARCAL1-210ENST00000445153 PIEZO1Q92508 2521 aa16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 STBD1O95210 358 aa16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 OATP04181 439 aa16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 LAG3P18627 525 aa16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 RPS6KB1P23443 525 aa16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 EIF4BP23588 611 aaKnown RBP16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.16
SMARCAL1-210ENST00000445153 MRE11P49959 708 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms