RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 CNTNAP5Q8WYK1 1306 aa23.25■■□□□ 1.31
TMEM50B-204ENST00000442441 AVPR2P30518 371 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 ZNF76P36508 570 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 PLCB3Q01970 1234 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 SYCE2Q6PIF2 218 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 SYNE3Q6ZMZ3 975 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 FAM228AQ86W67 206 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 PPP1R16BQ96T49 567 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 OSMRQ99650 979 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 TCF25Q9BQ70 676 aa23.24■■□□□ 1.31
TMEM50B-204ENST00000442441 CFAP54Q96N23 3096 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 C22orf31O95567 290 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 ATP4AP20648 1035 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 AP3B2Q13367 1082 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 DSC3Q14574 896 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 CREB3L3Q68CJ9 461 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 SWSAP1Q6NVH7 229 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 MIS18BP1Q6P0N0 1132 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 SNX27Q96L92 541 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 TMEM117Q9H0C3 514 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 NGRNQ9NPE2 291 aaKnown RBP23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 ENTPD7Q9NQZ7 604 aa23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 RBM28Q9NW13 759 aaKnown RBP23.23■■□□□ 1.31
TMEM50B-204ENST00000442441 SMCO2A6NFE2 343 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 HIDE1A8MVS5 230 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 hCG_1984214I3L0E3 225 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 DHX15O43143 795 aaKnown RBP23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 GPR32O75388 356 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 LLGL2Q6P1M3 1020 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 APOA5Q6Q788 366 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 ZBTB33Q86T24 672 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 PLA2G4DQ86XP0 818 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 ZNF713Q8N859 430 aaPredicted RBP23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 APOL5Q9BWW9 433 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 IRF2BPLQ9H1B7 796 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 GLT8D2Q9H1C3 349 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 FAM86C1Q9NVL1 165 aa23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
TMEM50B-204ENST00000442441 FAM86B1E9PN63 330 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 HOXA2O43364 376 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 VTNP04004 478 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 FAM86B2P0C5J1 330 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 HOXB8P17481 243 aaPredicted RBP23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 CLK2P49760 499 aaKnown RBP23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 FUT2Q10981 343 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 NECTIN1Q15223 517 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 KCNT2Q6UVM3 1135 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 LRRC55Q6ZSA7 311 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 CKAP2LQ8IYA6 745 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 METTL13Q8N6R0 699 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 BBXQ8WY36 941 aaPredicted RBP23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 CASD1Q96PB1 797 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 BARHL2Q9NY43 387 aa23.21■■□□□ 1.31
TMEM50B-204ENST00000442441 IPO5O00410 1097 aaKnown RBP23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 PPM1AP35813 382 aa23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 ATOH1Q92858 354 aaPredicted RBP23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 ZNF558Q96NG5 402 aa23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 RNF19AQ9NV58 838 aa23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 MAFBQ9Y5Q3 323 aaPredicted RBP23.2■■□□□ 1.3
TMEM50B-204ENST00000442441 IGLV3-22A0A075B6J6 115 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 GFRA3O60609 400 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 SP100P23497 879 aaPredicted RBP23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 KRT17Q04695 432 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 RTN1Q16799 776 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 TMC7Q7Z402 723 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 LRRC43Q8N309 656 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 RIPOR3Q96MK2 946 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 NR2E1Q9Y466 385 aa23.19■■□□□ 1.3
TMEM50B-204ENST00000442441 PBX3P40426 434 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 NUBP1P53384 320 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 ABI1Q8IZP0 508 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 CASP10Q92851 521 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 ESYT1Q9BSJ8 1104 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 ZNF577Q9BSK1 485 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 TBC1D22BQ9NU19 505 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 SPG21Q9NZD8 308 aa23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 MYH9P35579 1960 aaKnown RBP23.18■■□□□ 1.3
TMEM50B-204ENST00000442441 ZBTB43O43298 467 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 PDGFBP01127 241 aaPredicted RBP23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 CYP3A4P08684 503 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 ZSCAN20P17040 1043 aaPredicted RBP23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 CLCN3P51790 818 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 TPRNQ4KMQ1 711 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 JAKMIP3Q5VZ66 844 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 TRMT1LQ7Z2T5 733 aaKnown RBP23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 KREMEN2Q8NCW0 462 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 CRYGNQ8WXF5 182 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 YTHDC1Q96MU7 727 aaKnown RBP23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 CEP131Q9UPN4 1083 aa23.17■■□□□ 1.3
TMEM50B-204ENST00000442441 MAGEB2O15479 319 aa23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 NLRP11P59045 1033 aaKnown RBP23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 CES5AQ6NT32 575 aa23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 ECHDC2Q86YB7 292 aa23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 SMAP1Q8IYB5 467 aaPredicted RBP23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 UBALD2Q8IYN6 164 aa23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 MRPL43Q8N983 215 aaKnown RBP23.16■■□□□ 1.3
TMEM50B-204ENST00000442441 NECTIN4Q96NY8 510 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms