RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FTSJ1Q9UET6 329 aa6.7□□□□□ -1.34
PFDN4-202ENST00000441080 KCNG1Q9UIX4 513 aa6.7□□□□□ -1.34
PFDN4-202ENST00000441080 ELL2O00472 640 aaPredicted RBP6.69□□□□□ -1.34
PFDN4-202ENST00000441080 BCAR1P56945 870 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 MAP3K12Q12852 859 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 NFATC3Q12968 1075 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 MTMR1Q13613 665 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 NOLC1Q14978 699 aaKnown RBP eCLIP6.69□□□□□ -1.34
PFDN4-202ENST00000441080 PDCD1Q15116 288 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 RGL3Q3MIN7 710 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 KANSL1Q7Z3B3 1105 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 ANO3Q9BYT9 981 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 TRIM8Q9BZR9 551 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 TYW1Q9NV66 732 aaKnown RBP6.69□□□□□ -1.34
PFDN4-202ENST00000441080 DDX56Q9NY93 547 aaKnown RBP6.69□□□□□ -1.34
PFDN4-202ENST00000441080 FBXO10Q9UK96 956 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 PPP2R3BQ9Y5P8 575 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
PFDN4-202ENST00000441080 GOLGA8AA7E2F4 631 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 GOLGA8BA8MQT2 603 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 K7ESF4 209 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 MAFO75444 373 aaPredicted RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 CYP1A1P04798 512 aaPredicted RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 MANFP55145 182 aaKnown RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 SCAND1P57086 179 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 ERVK-21P61565 698 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 MOGSQ13724 837 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 BRDTQ58F21 947 aaPredicted RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 ZBTB41Q5SVQ8 909 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 GRAMD4Q6IC98 578 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 UNQ6494/PRO21346Q6UXR6 183 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 LRRC56Q8IYG6 542 aaPredicted RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 NUDT10Q8NFP7 164 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 ACAP3Q96P50 834 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 PUS7Q96PZ0 661 aaKnown RBP6.68□□□□□ -1.34
PFDN4-202ENST00000441080 MENTQ9BUN1 341 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 MTG2Q9H4K7 406 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 TRHDEQ9UKU6 1024 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 WASHC2CQ9Y4E1 1318 aa6.68□□□□□ -1.34
PFDN4-202ENST00000441080 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 MAFGO15525 162 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 KLHL18O94889 574 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 CLEC2LP0C7M8 214 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 SYDE2Q5VT97 1194 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 MCTP2Q6DN12 878 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 CCDC62Q6P9F0 684 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 CMIPQ8IY22 773 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 TP53I13Q8NBR0 393 aaPredicted RBP6.67□□□□□ -1.34
PFDN4-202ENST00000441080 ADAMTS17Q8TE56 1095 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 YTHDC1Q96MU7 727 aaKnown RBP6.67□□□□□ -1.34
PFDN4-202ENST00000441080 SPATA25Q9BR10 227 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 TMEM168Q9H0V1 697 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 CCDC8Q9H0W5 538 aaPredicted RBP6.67□□□□□ -1.34
PFDN4-202ENST00000441080 KCMF1Q9P0J7 381 aa6.67□□□□□ -1.34
PFDN4-202ENST00000441080 A0A0G2JNJ9 132 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 PRSS38A1L453 326 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 PCDH8O95206 1070 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 POLD1P28340 1107 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 EXOSC10Q01780 885 aaKnown RBP6.66□□□□□ -1.34
PFDN4-202ENST00000441080 KLF1Q13351 362 aaPredicted RBP6.66□□□□□ -1.34
PFDN4-202ENST00000441080 FAM26FQ5R3K3 315 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 IFNL2Q8IZJ0 200 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 OR5AN1Q8NGI8 311 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 ZSCAN18Q8TBC5 510 aaPredicted RBP6.66□□□□□ -1.34
PFDN4-202ENST00000441080 STAG1Q8WVM7 1258 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 LMBR1Q8WVP7 490 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 CEP89Q96ST8 783 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 SMAD5Q99717 465 aaKnown RBP6.66□□□□□ -1.34
PFDN4-202ENST00000441080 WNT8AQ9H1J5 351 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 Q9UFV3 132 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
PFDN4-202ENST00000441080 CUTAO60888 179 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 ENPP1P22413 925 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 CFPP27918 469 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 KCNQ1P51787 676 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 SLURP1P55000 103 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 TOP3AQ13472 1001 aaPredicted RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 FSCN1Q16658 493 aaKnown RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 DGKDQ16760 1214 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 CT83Q5H943 113 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 ZNF761Q86XN6 746 aaPredicted RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 TXNDC5Q8NBS9 432 aaKnown RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 TGFBRAP1Q8WUH2 860 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 ASPSCR1Q9BZE9 553 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 PITHD1Q9GZP4 211 aaPredicted RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 BARX1Q9HBU1 254 aaPredicted RBP6.65□□□□□ -1.34
PFDN4-202ENST00000441080 DENND2AQ9ULE3 1009 aa6.65□□□□□ -1.34
PFDN4-202ENST00000441080 MYPNQ86TC9 1320 aa6.65□□□□□ -1.35
PFDN4-202ENST00000441080 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 OPHN1O60890 802 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 HMGCRP04035 888 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 PFKMP08237 780 aa6.64□□□□□ -1.35
PFDN4-202ENST00000441080 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
PFDN4-202ENST00000441080 ETV4P43268 484 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms