RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 EEPD1Q7L9B9 569 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 ZNF668Q96K58 619 aaPredicted RBP22.1■■□□□ 1.13
FMR1-208ENST00000440235 DBR1Q9UK59 544 aaKnown RBP22.1■■□□□ 1.13
FMR1-208ENST00000440235 LSP1P33241 339 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 TOB1P50616 345 aaPredicted RBP22.1■■□□□ 1.13
FMR1-208ENST00000440235 CDCA7Q9BWT1 371 aaPredicted RBP22.1■■□□□ 1.13
FMR1-208ENST00000440235 SH2D4AQ9H788 454 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 RGL1Q9NZL6 768 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 EIF3HO15372 352 aaKnown RBP eCLIP22.1■■□□□ 1.133e-6■■□□□ 12.2
FMR1-208ENST00000440235 TRPA1O75762 1119 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 EIF2AK2P19525 551 aaKnown RBP22.1■■□□□ 1.13
FMR1-208ENST00000440235 LRRC31Q6UY01 552 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 CD248Q9HCU0 757 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 SAYSD1Q9NPB0 183 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 GINM1Q9NU53 330 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 PDE4DIPQ5VU43 2346 aa22.1■■□□□ 1.13
FMR1-208ENST00000440235 PPP1R3GB7ZBB8 358 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 SLC9A1P19634 815 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 ZNF473Q8WTR7 871 aaKnown RBP22.09■■□□□ 1.13
FMR1-208ENST00000440235 BRIP1Q9BX63 1249 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 FIS1Q9Y3D6 152 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 F5H423 210 aaPredicted RBP22.09■■□□□ 1.13
FMR1-208ENST00000440235 FTLP02792 175 aaPredicted RBP22.09■■□□□ 1.13
FMR1-208ENST00000440235 KCNJ6P48051 423 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 MFAP3P55082 362 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 IGBP1P78318 339 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 SH2D4BQ5SQS7 431 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 RNPC3Q96LT9 517 aaKnown RBP22.09■■□□□ 1.13
FMR1-208ENST00000440235 PDE1BQ01064 536 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 DMP1Q13316 513 aaPredicted RBP22.09■■□□□ 1.13
FMR1-208ENST00000440235 TRIM4Q9C037 500 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 TRIM65Q6PJ69 517 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 SPDL1Q96EA4 605 aa22.09■■□□□ 1.13
FMR1-208ENST00000440235 CCDC188H7C350 402 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 RAD51CO43502 376 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 KRT1P04264 644 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 YARSP54577 528 aaKnown RBP22.08■■□□□ 1.13
FMR1-208ENST00000440235 VTI1AQ96AJ9 217 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 CCDC14Q49A88 953 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
FMR1-208ENST00000440235 CEP170P1Q96L14 293 aa22.08■■□□□ 1.13
FMR1-208ENST00000440235 CNOT10Q9H9A5 744 aaKnown RBP22.08■■□□□ 1.13
FMR1-208ENST00000440235 ENO4A6NNW6 628 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 ERVV-1B6SEH8 477 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 RNF8O76064 485 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 PMS2P54278 862 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 RBM43Q6ZSC3 357 aaKnown RBP22.08■■□□□ 1.12
FMR1-208ENST00000440235 FAM84BQ96KN1 310 aaPredicted RBP22.08■■□□□ 1.12
FMR1-208ENST00000440235 PAGR1Q9BTK6 254 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 INPP5FQ9Y2H2 1132 aa22.08■■□□□ 1.12
FMR1-208ENST00000440235 MYMKA6NI61 221 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 GOLGA8RI6L899 631 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 PHBP35232 272 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 MDH1P40925 334 aaKnown RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 TFAMQ00059 246 aaKnown RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 C6orf118Q5T5N4 469 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 HDAC7Q8WUI4 952 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 NUF2Q9BZD4 464 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 CNOT8Q9UFF9 292 aaKnown RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 IFRD2Q12894 506 aaPredicted RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 PDXDC1Q6P996 788 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 ZC3H18Q86VM9 953 aaKnown RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 RAD54LQ92698 747 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 STAM2O75886 525 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 SRGNP10124 158 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 RFX6Q8HWS3 928 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 PFDN4Q9NQP4 134 aa22.07■■□□□ 1.12
FMR1-208ENST00000440235 NOP53Q9NZM5 478 aaKnown RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 SEPT9Q9UHD8 586 aaPredicted RBP22.07■■□□□ 1.12
FMR1-208ENST00000440235 KITP10721 976 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 NMT1P30419 496 aaKnown RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 CEP128Q6ZU80 1094 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 ILDR1Q86SU0 546 aaPredicted RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 GUF1Q8N442 669 aaKnown RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 C11orf70Q9BRQ4 267 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 PHF20Q9BVI0 1012 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 MT-ND3P03897 115 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 TMEM191BP0C7N4 346 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 PARP9Q8IXQ6 854 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 CHMP6Q96FZ7 201 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 C9orf72Q96LT7 481 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 ZWILCHQ9H900 591 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 XDHP47989 1333 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 A0A1W2PQC6 194 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 TOM1L1O75674 476 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 CSF1RP07333 972 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 ESRRAP11474 423 aaPredicted RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 ATP2B4P23634 1241 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 POLGP54098 1239 aaPredicted RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 RWDD2BP57060 319 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 LMBRD2Q68DH5 695 aaPredicted RBP22.06■■□□□ 1.12
FMR1-208ENST00000440235 BARHL2Q9NY43 387 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 PCDHA6Q9UN73 950 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 PCDHA8Q9Y5H6 950 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 CFLARO15519 480 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 PLS3P13797 630 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 SLMAPQ14BN4 828 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 ALX1Q15699 326 aa22.06■■□□□ 1.12
FMR1-208ENST00000440235 GLE1Q53GS7 698 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms