RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ADCY3O60266 1144 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 NPTXRO95502 500 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 KNG1P01042 644 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 SELENOPP49908 381 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 HERVK_113P62684 666 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 TMF1P82094 1093 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 PFKPQ01813 784 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 PUM1Q14671 1186 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 BTBD8Q5XKL5 378 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 ARHGAP36Q6ZRI8 547 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 SPATC1Q76KD6 591 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 C16orf59Q7L2K0 433 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 CXXC5Q7LFL8 322 aaKnown RBP4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 GGNQ86UU5 652 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZSWIM2Q8NEG5 633 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 MBD6Q96DN6 1003 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 AJUBAQ96IF1 538 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 SCYL1Q96KG9 808 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 SYT3Q9BQG1 590 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 DEF6Q9H4E7 631 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 KCND1Q9NSA2 647 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 PFDN2Q9UHV9 154 aa4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 POLR1AO95602 1720 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P11-201ENST00000440127 KDM2BQ8NHM5 1336 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 MYBBP1AQ9BQG0 1328 aaKnown RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 WASHC2CQ9Y4E1 1318 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 ATP7AQ04656 1500 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZFYVE16Q7Z3T8 1539 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 BLACEA4D250 179 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 ENPP3O14638 875 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 NKRFO15226 690 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 HIP1RO75146 1068 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 KLHL18O94889 574 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 INSRRP14616 1297 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 ZNF20P17024 532 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 PTPN1P18031 435 aaKnown RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 HSD3B2P26439 372 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 POLD1P28340 1107 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 GLRBP48167 497 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 DBPQ10586 325 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 CNGB1Q14028 1251 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 RASA3Q14644 834 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 YOD1Q5VVQ6 348 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 USP51Q70EK9 711 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 PROSER1Q86XN7 944 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 PNISRQ8TF01 805 aaKnown RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 MRFAP1L1Q96HT8 127 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 SFMBT1Q9UHJ3 866 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 TSC22D4Q9Y3Q8 395 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 TRAF6Q9Y4K3 522 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 SLC4A7Q9Y6M7 1214 aa4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 BRD4O60885 1362 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P11-201ENST00000440127 CD109Q6YHK3 1445 aa4.46□□□□□ -1.69
HMGB3P11-201ENST00000440127 TRPM1Q7Z4N2 1603 aa4.46□□□□□ -1.69
HMGB3P11-201ENST00000440127 EIF2AK4Q9P2K8 1649 aaKnown RBP4.46□□□□□ -1.69
HMGB3P11-201ENST00000440127 INO80Q9ULG1 1556 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 CCDC66A2RUB6 948 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 PRAMEF25A6NGN4 478 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 B4GALT4O60513 344 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 CLASP2O75122 1294 aaKnown RBP4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 WDR72Q3MJ13 1102 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 NUDT10Q8NFP7 164 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 NUDT11Q96G61 164 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 MAGEB10Q96LZ2 347 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 LMF1Q96S06 567 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 TESK2Q96S53 571 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 SRPK1Q96SB4 655 aaKnown RBP4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 CD244Q9BZW8 370 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 PPP4R1LQ9P1A2 415 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 SRRDQ9UH36 339 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 LAMC1P11047 1609 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 TRPM2O94759 1503 aa4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 PRDM15P57071 1507 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P11-201ENST00000440127 VWDEQ8N2E2 1590 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 ZNF518AQ6AHZ1 1483 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 DISP3Q9P2K9 1392 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 B4E1Z4 1266 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 MUSKO15146 869 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 LTFP02788 710 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 COL6A1P12109 1028 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 PDE6AP16499 860 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 KRT15P19012 456 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 PTGS1P23219 599 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 ETV4P43268 484 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 DNM2P50570 870 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 RAC3P60763 192 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 FAM209AQ5JX71 171 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 GIMAP8Q8ND71 665 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 PCDH19Q8TAB3 1148 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 CALML6Q8TD86 181 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 THAP3Q8WTV1 239 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 E2F7Q96AV8 911 aa4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 RNPC3Q96LT9 517 aaKnown RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 TACO1Q9BSH4 297 aaKnown RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 MRPL4Q9BYD3 311 aaKnown RBP4.45□□□□□ -1.7
HMGB3P11-201ENST00000440127 KATNBL1Q9H079 304 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms