RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ST3GAL5Q9UNP4 418 aa22.91■■□□□ 1.26
NCKIPSD-206ENST00000439518 GPR182O15218 404 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 DTNBO60941 627 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 SARSP49591 514 aaKnown RBP22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 TARBP2Q15633 366 aaKnown RBP22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 ODR4Q5SWX8 454 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 EFCAB12Q6NXP0 572 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 OSMRQ99650 979 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 RGS18Q9NS28 235 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 GJB4Q9NTQ9 266 aa22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 MRPL42Q9Y6G3 142 aaKnown RBP22.9■■□□□ 1.26
NCKIPSD-206ENST00000439518 GRM6O15303 877 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 MIER3Q7Z3K6 550 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 FAM228AQ86W67 206 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 PPP1R16BQ96T49 567 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 ADAM2Q99965 735 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 PLVAPQ9BX97 442 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 LMAN2LQ9H0V9 348 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 ADAMTS10Q9H324 1103 aa22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 DDX25Q9UHL0 483 aaKnown RBP22.89■■□□□ 1.25
NCKIPSD-206ENST00000439518 C9IYK1 514 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 SLC37A4O43826 429 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 STBD1O95210 358 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 XBP1P17861 261 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 TMOD1P28289 359 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 COL19A1Q14993 1142 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 TCEAL5Q5H9L2 206 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 SLC24A5Q71RS6 500 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 ZNF710Q8N1W2 664 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 LRRC71Q8N4P6 559 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 MAP7D2Q96T17 732 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 NIFKQ9BYG3 293 aaKnown RBP22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 NSUN3Q9H649 340 aaKnown RBP22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 C1orf112Q9NSG2 853 aa22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 ORC3Q9UBD5 711 aaPredicted RBP22.88■■□□□ 1.25
NCKIPSD-206ENST00000439518 CCDC194A0A1B0GVG4 234 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 DENND3A2RUS2 1198 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 NLRP11P59045 1033 aaKnown RBP22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 DSC3Q14574 896 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 LETM2Q2VYF4 491 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 LEXMQ3ZCV2 418 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 XKR3Q5GH77 459 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 PPP4R3AQ6IN85 833 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 OXER1Q8TDS5 423 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 P2RX5Q93086 422 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 CEP89Q96ST8 783 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 LRFN2Q9ULH4 789 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 AKT3Q9Y243 479 aa22.87■■□□□ 1.25
NCKIPSD-206ENST00000439518 FDPSP14324 419 aaKnown RBP22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 GCFC2P16383 781 aaKnown RBP22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 KCNA5P22460 613 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 GATMP50440 423 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 FAM189BP81408 668 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 TBC1D8BQ0IIM8 1120 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 ME3Q16798 604 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 PAN2Q504Q3 1202 aaKnown RBP22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 NEK8Q86SG6 692 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 NECAB1Q8N987 351 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 KCNMB3Q9NPA1 279 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 RNF216Q9NWF9 866 aaPredicted RBP22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 PLAGL2Q9UPG8 496 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 PCDHB7Q9Y5E2 793 aa22.86■■□□□ 1.25
NCKIPSD-206ENST00000439518 LARGE1O95461 756 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 EIF4BP23588 611 aaKnown RBP22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 GPC3P51654 580 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 CAMK1Q14012 370 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 NAALADL2Q58DX5 795 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 WASF1Q92558 559 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 GTF3C6Q969F1 213 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 FAM20AQ96MK3 541 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 VAV3Q9UKW4 847 aa22.85■■□□□ 1.25
NCKIPSD-206ENST00000439518 IGKV6-21A0A0C4DH24 114 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 TMEM150BA6NC51 233 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 EML1O00423 815 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 EIF5BO60841 1220 aaKnown RBP22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 SEC24BO95487 1268 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 MMP1P03956 469 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 PPP2R5CQ13362 524 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 PIK3AP1Q6ZUJ8 805 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 NEK9Q8TD19 979 aa22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 PABPC5Q96DU9 382 aaKnown RBP22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 ALG13Q9NP73 1137 aaKnown RBP22.84■■□□□ 1.25
NCKIPSD-206ENST00000439518 ITGB1P05556 798 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 DARSP14868 501 aaKnown RBP22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 DRP2Q13474 957 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 MTERF2Q49AM1 385 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 EARS2Q5JPH6 523 aaKnown RBP22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 FAM102BQ5T8I3 360 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 SPPL3Q8TCT6 385 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 HAS1Q92839 578 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 ELAC1Q9H777 363 aaKnown RBP22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 TMEM161AQ9NX61 479 aa22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 SEPT9Q9UHD8 586 aaPredicted RBP22.83■■□□□ 1.25
NCKIPSD-206ENST00000439518 ATG2AQ2TAZ0 1938 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 TBX3O15119 743 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 CCNT1O60563 726 aaKnown RBP22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 IBSPP21815 317 aaPredicted RBP22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 DNAJB1P25685 340 aa22.82■■□□□ 1.24
NCKIPSD-206ENST00000439518 NEK4P51957 841 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms