RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SCFD1Q8WVM8 642 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 ALG3Q92685 438 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 ARHGEF26Q96DR7 871 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 SAAL1Q96ER3 474 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 PRPHP41219 470 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 VPS41P49754 854 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 MIS18BP1Q6P0N0 1132 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 PIGWQ7Z7B1 504 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 SLC35G2Q8TBE7 412 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 DNAJC19Q96DA6 116 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 C6orf50Q9HD87 102 aa14.51□□□□□ -0.09
ACTN1-204ENST00000438964 SPATS2LQ9NUQ6 558 aaKnown RBP14.51□□□□□ -0.09
ACTN1-204ENST00000438964 USP17L5A8MUK1 530 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 GHRP10912 638 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 BARGINQ6ZT62 677 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 GPBP1Q86WP2 473 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 C1orf131Q8NDD1 294 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 OSBPL1AQ9BXW6 950 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 GPCPD1Q9NPB8 672 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 EMILIN3Q9NT22 766 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ADAM22Q9P0K1 906 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 RPTORQ8N122 1335 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SPDYE5A6NIY4 337 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 LRRN2O75325 713 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ADAMTS2O95450 1211 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 MMP13P45452 471 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 RPL21P46778 160 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ARHGAP44Q17R89 818 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ZCWPW2Q504Y3 356 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 HOOK3Q86VS8 718 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 DZIP1Q86YF9 867 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 JAMLQ86YT9 394 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 MAGEC3Q8TD91 643 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 KRT35Q92764 455 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 CALR3Q96L12 384 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SLC5A4Q9NY91 659 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 AFF2P51816 1311 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ATMINO43313 823 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 EDIL3O43854 480 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SNX3O60493 162 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SMNDC1O75940 238 aaKnown RBP eCLIP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 FGRP09769 529 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 LINGO3P0C6S8 592 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 SLURP2P0DP57 97 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ZBTB48P10074 688 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 PON1P27169 355 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 EXOC3L4Q17RC7 722 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 ZNF746Q6NUN9 644 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 PRUNE1Q86TP1 453 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 MAB21L3Q8N8X9 362 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 PABPC3Q9H361 631 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 CNOT10Q9H9A5 744 aaKnown RBP14.5□□□□□ -0.09
ACTN1-204ENST00000438964 AMFRQ9UKV5 643 aa14.5□□□□□ -0.09
ACTN1-204ENST00000438964 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 PPFIA2O75334 1257 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 MSH2P43246 934 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 TMEM266Q2M3C6 531 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 POTEGQ6S5H5 508 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 ZDHHC24Q6UX98 284 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 LRRC47Q8N1G4 583 aaKnown RBP14.49□□□□□ -0.09
ACTN1-204ENST00000438964 ERP44Q9BS26 406 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 ZDHHC18Q9NUE0 388 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 AIPL1Q9NZN9 384 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 CCDC88AQ3V6T2 1871 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 PVALEFA0A1B0GWK0 134 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 TMEM120BA0PK00 339 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 LAD1O00515 517 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 SLC8A3P57103 927 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 KLRC3Q07444 240 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 LNX1Q8TBB1 728 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-204ENST00000438964 BTBD6Q96KE9 485 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 ETNK1Q9HBU6 452 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 SH3GLB2Q9NR46 395 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 FAM114A2Q9NRY5 505 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 GCNT4Q9P109 453 aa14.49□□□□□ -0.09
ACTN1-204ENST00000438964 RSPH10B2B2RC85 870 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 RASGRF2O14827 1237 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 RSPH10BP0C881 870 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 SLC16A2P36021 539 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 IRX1P78414 480 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-204ENST00000438964 CDCA2Q69YH5 1023 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ZNF449Q6P9G9 518 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 EXOC3L1Q86VI1 746 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ZDHHC14Q8IZN3 488 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 ELMO3Q96BJ8 720 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 IQCDQ96DY2 449 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 FAM118BQ9BPY3 351 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 THAP2Q9H0W7 228 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 MAGEF1Q9HAY2 307 aa14.48□□□□□ -0.09
ACTN1-204ENST00000438964 DOCK2Q92608 1830 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms