RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
RTN4-211ENST00000438462 ZBP1Q9H171 429 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 CHRDQ9H2X0 955 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 SRPK3Q9UPE1 567 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
RTN4-211ENST00000438462 SATB1Q01826 763 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 BMS1Q14692 1282 aaKnown RBP13.09□□□□□ -0.31
RTN4-211ENST00000438462 PLA2G2CQ5R387 149 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
RTN4-211ENST00000438462 LRRC55Q6ZSA7 311 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 FGF14Q92915 247 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 NELL2Q99435 816 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 KCNK4Q9NYG8 393 aa13.09□□□□□ -0.31
RTN4-211ENST00000438462 MYH7P12883 1935 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 MGEA5O60502 916 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
RTN4-211ENST00000438462 FGD1P98174 961 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 KCNC4Q03721 635 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 LONP2Q86WA8 852 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 TRIM50Q86XT4 487 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
RTN4-211ENST00000438462 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
RTN4-211ENST00000438462 SLC16A2P36021 539 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 MPLP40238 635 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
RTN4-211ENST00000438462 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 LRRC43Q8N309 656 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 CMASQ8NFW8 434 aaPredicted RBP13.07□□□□□ -0.32
RTN4-211ENST00000438462 LOXL4Q96JB6 756 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 TAAR1Q96RJ0 339 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
RTN4-211ENST00000438462 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 SPAG17Q6Q759 2223 aa13.07□□□□□ -0.32
RTN4-211ENST00000438462 LILRB3O75022 631 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 PRDM1O75626 825 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 UBA1P22314 1058 aaKnown RBP13.06□□□□□ -0.32
RTN4-211ENST00000438462 CLCN4P51793 760 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 PFKPQ01813 784 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 GIT2Q14161 759 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 ZNF852Q6ZMS4 543 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 NSUN6Q8TEA1 469 aaKnown RBP13.06□□□□□ -0.32
RTN4-211ENST00000438462 IER2Q9BTL4 223 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 NDRG2Q9UN36 371 aaKnown RBP13.06□□□□□ -0.32
RTN4-211ENST00000438462 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 ASXL3Q9C0F0 2248 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
RTN4-211ENST00000438462 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 FAM221BA6H8Z2 402 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 CTSAP10619 480 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTN4-211ENST00000438462 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 MDM1Q8TC05 714 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 ATP6V0A4Q9HBG4 840 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 JADE2Q9NQC1 790 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 MAN1C1Q9NR34 630 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTN4-211ENST00000438462 MRPS17Q9Y2R5 130 aaKnown RBP13.05□□□□□ -0.32
RTN4-211ENST00000438462 SQORQ9Y6N5 450 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 SLC4A4Q9Y6R1 1079 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 DOPEY1Q5JWR5 2465 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 COL12A1Q99715 3063 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 SDK1Q7Z5N4 2213 aa13.05□□□□□ -0.32
RTN4-211ENST00000438462 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 SHISA7A6NL88 538 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 INPPL1O15357 1258 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 EIF3JO75822 258 aaKnown RBP13.04□□□□□ -0.32
RTN4-211ENST00000438462 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
RTN4-211ENST00000438462 RAP1GAPP47736 663 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 CXCL12P48061 93 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 ZNF444Q8N0Y2 327 aaPredicted RBP13.04□□□□□ -0.32
RTN4-211ENST00000438462 SMG7Q92540 1137 aaKnown RBP13.04□□□□□ -0.32
RTN4-211ENST00000438462 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 TMEM117Q9H0C3 514 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 TUBE1Q9UJT0 475 aa13.04□□□□□ -0.32
RTN4-211ENST00000438462 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms