RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 DDRGK1Q96HY6 314 aa10.71□□□□□ -0.69
RPE-209ENST00000438191 LOXL4Q96JB6 756 aa10.71□□□□□ -0.69
RPE-209ENST00000438191 IWS1Q96ST2 819 aa10.71□□□□□ -0.69
RPE-209ENST00000438191 RHOBTB2Q9BYZ6 727 aa10.71□□□□□ -0.69
RPE-209ENST00000438191 ATXN7O15265 892 aaPredicted RBP10.7□□□□□ -0.7
RPE-209ENST00000438191 MGEA5O60502 916 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 LILRB3O75022 631 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 EIF3JO75822 258 aaKnown RBP10.7□□□□□ -0.7
RPE-209ENST00000438191 FGFR1P11362 822 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 CCR3P51677 355 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 MRPS6P82932 125 aaKnown RBP10.7□□□□□ -0.7
RPE-209ENST00000438191 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 CEP68Q76N32 757 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 NSUN6Q8TEA1 469 aaKnown RBP10.7□□□□□ -0.7
RPE-209ENST00000438191 FGF14Q92915 247 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 IER2Q9BTL4 223 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 EDEM2Q9BV94 578 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 COL20A1Q9P218 1284 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 ARPP21Q9UBL0 812 aaPredicted RBP10.7□□□□□ -0.7
RPE-209ENST00000438191 SPAG17Q6Q759 2223 aa10.7□□□□□ -0.7
RPE-209ENST00000438191 CELSR3Q9NYQ7 3312 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 PLIN4Q96Q06 1357 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 SHISA7A6NL88 538 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 C9IYK1 514 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 SLC16A2P36021 539 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 CLCN4P51793 760 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 SATB1Q01826 763 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 SP2Q02086 613 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 PAK2Q13177 524 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 GIT2Q14161 759 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 TTF1Q15361 905 aaPredicted RBP10.69□□□□□ -0.7
RPE-209ENST00000438191 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 BTNL9Q6UXG8 535 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 CYP26C1Q6V0L0 522 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 TPRG1Q6ZUI0 275 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 LONP2Q86WA8 852 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 ZNF444Q8N0Y2 327 aaPredicted RBP10.69□□□□□ -0.7
RPE-209ENST00000438191 ZNF687Q8N1G0 1237 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 TBC1D5Q92609 795 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 CRELD1Q96HD1 420 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
RPE-209ENST00000438191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.69□□□□□ -0.7
RPE-209ENST00000438191 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 LAMA1P25391 3075 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 CCDC195A0A1B0GUA6 201 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 CTSAP10619 480 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 RAP1GAPP47736 663 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 FGD1P98174 961 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 PFKPQ01813 784 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 SBK1Q52WX2 424 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 SYDE2Q5VT97 1194 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 PARM1Q6UWI2 310 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 NEDD1Q8NHV4 660 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
RPE-209ENST00000438191 SSH1Q8WYL5 1049 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 EAF2Q96CJ1 260 aaPredicted RBP10.68□□□□□ -0.7
RPE-209ENST00000438191 CASD1Q96PB1 797 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 TMEM117Q9H0C3 514 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 RGS18Q9NS28 235 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 RAXQ9Y2V3 346 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 MYO9AB2RTY4 2548 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 ACACAQ13085 2346 aa10.68□□□□□ -0.7
RPE-209ENST00000438191 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 PRDM1O75626 825 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 UBA1P22314 1058 aaKnown RBP10.67□□□□□ -0.7
RPE-209ENST00000438191 CXCL12P48061 93 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 KCNC4Q03721 635 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 ZNF852Q6ZMS4 543 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 SLC24A5Q71RS6 500 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 GET4Q7L5D6 327 aaPredicted RBP10.67□□□□□ -0.7
RPE-209ENST00000438191 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 DEFB124Q8NES8 71 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 CCDC86Q9H6F5 360 aaKnown RBP10.67□□□□□ -0.7
RPE-209ENST00000438191 MLXIPQ9HAP2 919 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 ATP6V0A4Q9HBG4 840 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 VPS45Q9NRW7 570 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 C1orf112Q9NSG2 853 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 RNF19AQ9NV58 838 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 MRPS17Q9Y2R5 130 aaKnown RBP10.67□□□□□ -0.7
RPE-209ENST00000438191 PCDHGA5Q9Y5G8 931 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 TRPV2Q9Y5S1 764 aa10.67□□□□□ -0.7
RPE-209ENST00000438191 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
RPE-209ENST00000438191 NT5C1B-RDH14C9J2C7 533 aa10.66□□□□□ -0.7
RPE-209ENST00000438191 INPPL1O15357 1258 aa10.66□□□□□ -0.7
RPE-209ENST00000438191 NR3C2P08235 984 aa10.66□□□□□ -0.7
RPE-209ENST00000438191 EIF2AK2P19525 551 aaKnown RBP10.66□□□□□ -0.7
RPE-209ENST00000438191 MPLP40238 635 aa10.66□□□□□ -0.7
RPE-209ENST00000438191 POLGP54098 1239 aaPredicted RBP10.66□□□□□ -0.7
RPE-209ENST00000438191 TMEM266Q2M3C6 531 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms