RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
HDAC8-213ENST00000436675 METTL13Q8N6R0 699 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 RNF169Q8NCN4 708 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 CASD1Q96PB1 797 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 TMEM161AQ9NX61 479 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 SORCS3Q9UPU3 1222 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
HDAC8-213ENST00000436675 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
HDAC8-213ENST00000436675 ATG7O95352 703 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF76P36508 570 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 PLCB3Q01970 1234 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 AAMPQ13685 434 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 FAM160B1Q5W0V3 765 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 CES5AQ6NT32 575 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 KANK3Q6NY19 840 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 PDXDC2PQ6P474 469 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 ABHD15Q6UXT9 468 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 CKAP2LQ8IYA6 745 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 RASGRP4Q8TDF6 673 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 NGRNQ9NPE2 291 aaKnown RBP16.87■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF302Q9NR11 478 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 RNF19AQ9NV58 838 aa16.87■□□□□ 0.29
HDAC8-213ENST00000436675 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 PRR23AA6NEV1 266 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 ZBTB42B2RXF5 422 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 PROB1E7EW31 1015 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 MCM5P33992 734 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 SLC26A2P50443 739 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 CRYBB1P53674 252 aaPredicted RBP16.86■□□□□ 0.29
HDAC8-213ENST00000436675 NAPAP54920 295 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 FAM189BP81408 668 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 KRT17Q04695 432 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 DSC3Q14574 896 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF484Q5JVG2 852 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 RARS2Q5T160 578 aaKnown RBP16.86■□□□□ 0.29
HDAC8-213ENST00000436675 WWC2Q6AWC2 1192 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 TYW1BQ6NUM6 668 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 SWSAP1Q6NVH7 229 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 TMTC3Q6ZXV5 915 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 UBALD2Q8IYN6 164 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 ABI1Q8IZP0 508 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 C12orf76Q8N812 135 aaPredicted RBP16.86■□□□□ 0.29
HDAC8-213ENST00000436675 CASP10Q92851 521 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 ANO3Q9BYT9 981 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 HCFC2Q9Y5Z7 792 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 SLC12A7Q9Y666 1083 aa16.86■□□□□ 0.29
HDAC8-213ENST00000436675 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 SGSM2O43147 1006 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 CALM1P0DP23 149 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 CALM2P0DP24 149 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 CALM3P0DP25 149 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 ATP4AP20648 1035 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 FRMD5Q7Z6J6 570 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 FANCBQ8NB91 859 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 MFSD1Q9H3U5 465 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
HDAC8-213ENST00000436675 SPG21Q9NZD8 308 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 LIMD1Q9UGP4 676 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 COL1A2P08123 1366 aa16.85■□□□□ 0.29
HDAC8-213ENST00000436675 WDR81Q562E7 1941 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 C2orf71A6NGG8 1288 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 NT5C1B-RDH14C9J2C7 533 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 MEIS1O00470 390 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 CLASP2O75122 1294 aaKnown RBP16.84■□□□□ 0.29
HDAC8-213ENST00000436675 GPR32O75388 356 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 C22orf31O95567 290 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 PPM1AP35813 382 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
HDAC8-213ENST00000436675 CLCN3P51790 818 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 NUBP1P53384 320 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 SMC1AQ14683 1233 aaKnown RBP16.84■□□□□ 0.29
HDAC8-213ENST00000436675 MIS18BP1Q6P0N0 1132 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 PLA2G4DQ86XP0 818 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 LRRC43Q8N309 656 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 RIC8AQ9NPQ8 531 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 ZNF292O60281 2723 aa16.84■□□□□ 0.29
HDAC8-213ENST00000436675 HOXA2O43364 376 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 ZSCAN20P17040 1043 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-213ENST00000436675 NBL1P41271 181 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 ADCY7P51828 1080 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 NLRP11P59045 1033 aaKnown RBP16.83■□□□□ 0.28
HDAC8-213ENST00000436675 FOXK2Q01167 660 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 CLLU1OSQ5K130 101 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 ASTLQ6HA08 431 aaPredicted RBP16.83■□□□□ 0.28
HDAC8-213ENST00000436675 ECHDC2Q86YB7 292 aa16.83■□□□□ 0.28
HDAC8-213ENST00000436675 MRPL43Q8N983 215 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms