RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CYP2C19P33261 490 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CCT6AP40227 531 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 STAT6P42226 847 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 FLT3LGP49771 235 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 KRT76Q01546 638 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CYP4A11Q02928 519 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 PRKCZQ05513 592 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ACVR2BQ13705 512 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CTTNQ14247 550 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ZRSR1Q15695 479 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 PRAMEF19Q5SWL8 479 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 OLFML2BQ68BL8 750 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 KCNV1Q6PIU1 500 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 RBM43Q6ZSC3 357 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 MIER3Q7Z3K6 550 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ELOA2Q8IYF1 753 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 GRAMD1CQ8IYS0 662 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CNNM3Q8NE01 707 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ERMNQ8TAM6 284 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CD99L2Q8TCZ2 262 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SCFD2Q8WU76 684 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 CALML4Q96GE6 196 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 DYDC2Q96IM9 177 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SDF4Q9BRK5 362 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 PYM1Q9BRP8 204 aaKnown RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 POLR3CQ9BUI4 534 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 TNMDQ9H2S6 317 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 BLOC1S4Q9NUP1 217 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF358Q9NW07 568 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 SLC9A2Q9UBY0 812 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 USP25Q9UHP3 1055 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 THSD7BQ9C0I4 1608 aa7.87□□□□□ -1.15
LSM3P3-201ENST00000436601 MYH15Q9Y2K3 1946 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 GSTTP1A0A1W2PQM5 241 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 E9PMD0 336 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ERVH48-1M5A8F1 160 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 CTAGE5O15320 804 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 FARP2O94887 1054 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 GGPS1O95749 300 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF865P0CJ78 1059 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 TXNP10599 105 aaKnown RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 SMPD1P17405 629 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 SFNP31947 248 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ADCYAP1R1P41586 468 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 JAK3P52333 1124 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ACTR2P61160 394 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 PSMC6P62333 389 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 DHX9Q08211 1270 aaKnown RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 NEDD9Q14511 834 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 KIF22Q14807 665 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 UGCGQ16739 394 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 CELF3Q5SZQ8 465 aaKnown RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 HAUS3Q68CZ6 603 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 IQSEC1Q6DN90 963 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 POTEGQ6S5H5 508 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ABHD15Q6UXT9 468 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 TPH2Q8IWU9 490 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 CKAP2LQ8IYA6 745 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 SMAP1Q8IYB5 467 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 CEP57L1Q8IYX8 460 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ANKLE1Q8NAG6 615 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 GIMAP8Q8ND71 665 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 RDM1Q8NG50 284 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 RASSF8Q8NHQ8 419 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ZNF296Q8WUU4 475 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 TRIB2Q92519 343 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 RAD54LQ92698 747 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 STAMQ92783 540 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ERCC4Q92889 916 aaPredicted RBP7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 COPS5Q92905 334 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 ABHD16BQ9H3Z7 469 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 CUEDC2Q9H467 287 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 KBTBD4Q9NVX7 518 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 DCTN4Q9UJW0 460 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 PCDHA10Q9Y5I2 948 aa7.86□□□□□ -1.15
LSM3P3-201ENST00000436601 KDM3AQ9Y4C1 1321 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 SYCE3A1L190 88 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 WDR64B1ANS9 1081 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 ZBTB39O15060 712 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 ADCY6O43306 1168 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 FKTNO75072 461 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 LETM1O95202 739 aaPredicted RBP7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 STBD1O95210 358 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 LYPLA2O95372 231 aa7.85□□□□□ -1.15
LSM3P3-201ENST00000436601 P4HBP07237 508 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms