RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.78□□□□□ -1.32
VRK2-206ENST00000435505 C3orf20Q8ND61 904 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 RIPOR3Q96MK2 946 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 IRX2Q9BZI1 471 aaPredicted RBP6.78□□□□□ -1.32
VRK2-206ENST00000435505 VPS11Q9H270 941 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 SAMD15Q9P1V8 674 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 CEP72Q9P209 647 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 LIMCH1Q9UPQ0 1083 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 SAMM50Q9Y512 469 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 GRIN2DO15399 1336 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ENO4A6NNW6 628 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 K7ENM7 598 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 DLX3O60479 287 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ERLIN1O75477 346 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ECEL1O95672 775 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 PDHBP11177 359 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ATP1A3P13637 1013 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 HSPA4P34932 840 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 UBA7P41226 1012 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 RAD52P43351 418 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 NAP1L1P55209 391 aaKnown RBP6.78□□□□□ -1.32
VRK2-206ENST00000435505 INPP5AQ14642 412 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 HIF1AQ16665 826 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 CEP85LQ5SZL2 805 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 RETSATQ6NUM9 610 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 OR2C3Q8N628 320 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 IGSF22Q8N9C0 903 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 MSANTD4Q8NCY6 345 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ARHGAP45Q92619 1136 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 TEKT5Q96M29 485 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 CYP8B1Q9UNU6 501 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
VRK2-206ENST00000435505 ATXN2Q99700 1313 aaKnown RBP6.77□□□□□ -1.32
VRK2-206ENST00000435505 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.32
VRK2-206ENST00000435505 ADGRL3Q9HAR2 1447 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 LOC102724428A0A0B4J2F2 783 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TSPY2A6NKD2 308 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RASA4BC9J798 803 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RASA4O43374 803 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TSPY3P0CV98 308 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TSPY8P0CW00 308 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PECAM1P16284 738 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 HSPA6P17066 643 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 HOXC13P31276 330 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PPM1AP35813 382 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 KRT20P35900 424 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PIK3CBP42338 1070 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 SIK1P57059 783 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TSPY1Q01534 308 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 INTS11Q5TA45 600 aaKnown RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 KIAA1614Q5VZ46 1190 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 NUTM2GQ5VZR2 741 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TSPYL6Q8N831 410 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 DRAXINQ8NBI3 349 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 DEPTORQ8TB45 409 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 SMARCC1Q92922 1105 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 ISCA1Q9BUE6 129 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RNF38Q9H0F5 515 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 CENPHQ9H3R5 247 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 KLC4Q9NSK0 619 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 ANKEF1Q9NU02 776 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 MIS18AQ9NYP9 233 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 COL3A1P02461 1466 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 IFT140Q96RY7 1462 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 CDK12Q9NYV4 1490 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 CDC42BPBQ9Y5S2 1711 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 TOPBP1Q92547 1522 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PTPRTO14522 1441 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 GFRA2O00451 464 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 CUTAO60888 179 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 ZBED1O96006 694 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RHOXF2BP0C7M4 288 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 ZBTB48P10074 688 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 HSD3B1P14060 373 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PTGIRP43119 386 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 AARSP49588 968 aaKnown RBP eCLIP6.77□□□□□ -1.338e-6■■■■■ 52.4
VRK2-206ENST00000435505 IRAK1P51617 712 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 SEMA5AQ13591 1074 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 LRRC32Q14392 662 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 CLUL1Q15846 466 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PDCD2Q16342 344 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 ARSJQ5FYB0 599 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 SRGAP1Q7Z6B7 1085 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 CEP57Q86XR8 500 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 BCAS4Q8TDM0 211 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 ATRIPQ8WXE1 791 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RILPL2Q969X0 211 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 SPDL1Q96EA4 605 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 HAUS7Q99871 368 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 RHOXF2Q9BQY4 288 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 UTP14AQ9BVJ6 771 aaKnown RBP6.77□□□□□ -1.33
VRK2-206ENST00000435505 JAG2Q9Y219 1238 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 PPP2R2CQ9Y2T4 447 aa6.77□□□□□ -1.33
VRK2-206ENST00000435505 URB2Q14146 1524 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms