RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ZNF211Q13398 564 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 NAB2Q15742 525 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PFKFB3Q16875 520 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 NEK8Q86SG6 692 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 DNAJC17Q9NVM6 304 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 NKIRAS1Q9NYS0 192 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 TRIM33Q9UPN9 1127 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.13
SYNPO2-203ENST00000434046 SHBGP04278 402 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 H2AFZP0C0S5 128 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 OR52Z1P0C646 297 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MSH2P43246 934 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CDK17Q00537 523 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 DR1Q01658 176 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TRAF1Q13077 416 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MKRN4PQ13434 485 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 BYSLQ13895 437 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 UAP1Q16222 522 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CALCRLQ16602 461 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SBK1Q52WX2 424 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 RBM26Q5T8P6 1007 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 H2AFVQ71UI9 128 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ERMNQ8TAM6 284 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ANKS1AQ92625 1134 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 NAF1Q96HR8 494 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 RAB3IPQ96QF0 476 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 PIGSQ96S52 555 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TBK1Q9UHD2 729 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ATP6V0A2Q9Y487 856 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CCDC188H7C350 402 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 NKRFO15226 690 aaKnown RBP eCLIP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 RTN2O75298 545 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 LGR5O75473 907 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 FLOT1O75955 427 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 VEGFAP15692 232 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 FGFR4P22455 802 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 NT5C2P49902 561 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CACNB1Q02641 598 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 GRIK3Q13003 919 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SEPT2Q15019 361 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CERKLQ49MI3 558 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 LACTB2Q53H82 288 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MIIPQ5JXC2 388 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ALKBH5Q6P6C2 394 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TLDC1Q6P9B6 456 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TMEM154Q6P9G4 183 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TRMT1LQ7Z2T5 733 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 METTL13Q8N6R0 699 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SNX29Q8TEQ0 813 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CTNNBL1Q8WYA6 563 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MRRFQ96E11 262 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TTYH3Q9C0H2 523 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 DLGAP2Q9P1A6 1054 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 USP15Q9Y4E8 981 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 USP54Q70EL1 1684 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SSU72P8A0A1W2PR75 194 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 F8VZ95 297 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ACSL3O95573 720 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 GYS1P13807 737 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 PECAM1P16284 738 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ZNF131P52739 623 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 COPS2P61201 443 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TROAPQ12815 778 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CALCOCO2Q13137 446 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SLC29A2Q14542 456 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 SLC18A3Q16572 532 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 LRRC23Q53EV4 343 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MEI1Q5TIA1 1274 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 RASIP1Q5U651 963 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MIS18BP1Q6P0N0 1132 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 TMC3Q7Z5M5 1100 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CCDC105Q8IYK2 499 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MYOCDQ8IZQ8 938 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MAB21L3Q8N8X9 362 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CEP95Q96GE4 821 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 MASTLQ96GX5 879 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 ZNF570Q96NI8 536 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 C5P01031 1676 aa8.01□□□□□ -1.13
SYNPO2-203ENST00000434046 CETN3O15182 167 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 TTLL1O95922 423 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 GSTA1P08263 222 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 KRT16P08779 473 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 CACNB3P54284 484 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 SEMA3FQ13275 785 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 NBPF20Q3BBV1 942 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 FIGNQ5HY92 759 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 ERMARDQ5T6L9 678 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 CRELD2Q6UXH1 353 aaPredicted RBP8□□□□□ -1.13
SYNPO2-203ENST00000434046 SUPT20HQ8NEM7 779 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 JDP2Q8WYK2 163 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 GLG1Q92896 1179 aa8□□□□□ -1.13
SYNPO2-203ENST00000434046 INPP4AQ96PE3 977 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms