RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PURAQ00577 322 aaKnown RBP5.95□□□□□ -1.46
PTPN4-205ENST00000433888 DPTQ07507 201 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 ADGRE4PQ86SQ3 457 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 RTKN2Q8IZC4 609 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 SHCBP1Q8NEM2 672 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 CHFRQ96EP1 664 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 MAGEB10Q96LZ2 347 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-205ENST00000433888 TRIM8Q9BZR9 551 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 TANGO6Q9C0B7 1094 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 CEP72Q9P209 647 aa5.95□□□□□ -1.46
PTPN4-205ENST00000433888 SLC12A8A0AV02 714 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 APEX1P27695 318 aaKnown RBP5.94□□□□□ -1.46
PTPN4-205ENST00000433888 MCM7P33993 719 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 SAFB2Q14151 953 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPN4-205ENST00000433888 OTOP1Q7RTM1 612 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 RTN4RL1Q86UN2 441 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-205ENST00000433888 HIPK4Q8NE63 616 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 WDR48Q8TAF3 677 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 DEPDC7Q96QD5 511 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 IKZF4Q9H2S9 585 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-205ENST00000433888 SNTG2Q9NY99 539 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 VWA7Q9Y334 891 aa5.94□□□□□ -1.46
PTPN4-205ENST00000433888 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 ADCY7P51828 1080 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 ALDH6A1Q02252 535 aaKnown RBP5.93□□□□□ -1.46
PTPN4-205ENST00000433888 RIN1Q13671 783 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 TUBA3CQ13748 450 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 TUBA3EQ6PEY2 450 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 TMPRSS6Q8IU80 811 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 RABGGTAQ92696 567 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 DNAJC7Q99615 494 aa5.93□□□□□ -1.46
PTPN4-205ENST00000433888 PPP1R1BQ9UD71 204 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-205ENST00000433888 NPTXRO95502 500 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 MECP2P51608 486 aaKnown RBP5.92□□□□□ -1.46
PTPN4-205ENST00000433888 ADAM8P78325 824 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 ADAM15Q13444 863 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 TMEM132BQ14DG7 1078 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 TMEM177Q53S58 311 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 CC2D1AQ6P1N0 951 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-205ENST00000433888 SGMS1Q86VZ5 419 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 D2HGDHQ8N465 521 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 IGSF22Q8N9C0 903 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 CALML6Q8TD86 181 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 ARMC5Q96C12 935 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 MPHOSPH9Q99550 1183 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 HIRIP3Q9BW71 556 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-205ENST00000433888 MRPL4Q9BYD3 311 aaKnown RBP5.92□□□□□ -1.46
PTPN4-205ENST00000433888 TRIM39Q9HCM9 518 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 C11orf21Q9P2W6 132 aa5.92□□□□□ -1.46
PTPN4-205ENST00000433888 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
PTPN4-205ENST00000433888 CCDC163A0A0D9SF12 145 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 E9PSI1 815 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 GTF2F1P35269 517 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPN4-205ENST00000433888 ANTXR2P58335 489 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 ACAP1Q15027 740 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
PTPN4-205ENST00000433888 TMEM176AQ96HP8 235 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 CEP89Q96ST8 783 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 FOXB1Q99853 325 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 FAM184BQ9ULE4 1060 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 GIT1Q9Y2X7 761 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 SH3BP1Q9Y3L3 701 aa5.91□□□□□ -1.46
PTPN4-205ENST00000433888 C2orf78A6NCI8 922 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 DVL2O14641 736 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 STAT3P40763 770 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 ATP2C1P98194 919 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-205ENST00000433888 IRF9Q00978 393 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 RRP1BQ14684 758 aaKnown RBP5.9□□□□□ -1.46
PTPN4-205ENST00000433888 KLHDC10Q6PID8 442 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 LDLRAD3Q86YD5 345 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 THEMISQ8N1K5 641 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-205ENST00000433888 C2orf69Q8N8R5 385 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 NEU4Q8WWR8 484 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-205ENST00000433888 LPPQ93052 612 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 NKD2Q969F2 451 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-205ENST00000433888 MKL1Q969V6 931 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.46
PTPN4-205ENST00000433888 CAPN14A8MX76 684 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 HHEXQ03014 270 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 SMN1Q16637 294 aaKnown RBP5.89□□□□□ -1.47
PTPN4-205ENST00000433888 PCSK4Q6UW60 755 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 ZSWIM2Q8NEG5 633 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 ERCC4Q92889 916 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-205ENST00000433888 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
PTPN4-205ENST00000433888 HIP1RO75146 1068 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 PRLP01236 227 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 FNTBP49356 437 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 INHBCP55103 352 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 MAP3K12Q12852 859 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 Q6ZPA2 131 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 ZNF627Q7L945 461 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-205ENST00000433888 THAP3Q8WTV1 239 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-205ENST00000433888 GPHA2Q96T91 129 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms