RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 E2F4Q16254 413 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 EFCAB12Q6NXP0 572 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 UBE2Q1Q7Z7E8 422 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
CNOT9-205ENST00000433439 RETREG2Q8NC44 543 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 MTRQ99707 1265 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 PYM1Q9BRP8 204 aaKnown RBP17.07■□□□□ 0.32
CNOT9-205ENST00000433439 RUSC1Q9BVN2 902 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 ARID2Q68CP9 1835 aa17.07■□□□□ 0.32
CNOT9-205ENST00000433439 NPHP3-ACAD11A0A0J9YXS1 232 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 MAGEB2O15479 319 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 MAFO75444 373 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-205ENST00000433439 MCM4P33991 863 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 RFC5P40937 340 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 AFMP43652 599 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 CLCN3P51790 818 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 SLC12A3P55017 1021 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-205ENST00000433439 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 CEP89Q96ST8 783 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 SEZ6LQ9BYH1 1024 aa17.06■□□□□ 0.32
CNOT9-205ENST00000433439 FAM237AA0A1B0GTK4 181 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 NR1I2O75469 434 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 DGAT1O75907 488 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 ADAM17P78536 824 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 DRP2Q13474 957 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 SNX17Q15036 470 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 RINT1Q6NUQ1 792 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 GRAMD1CQ8IYS0 662 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
CNOT9-205ENST00000433439 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
CNOT9-205ENST00000433439 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
CNOT9-205ENST00000433439 GPRC5CQ9NQ84 441 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 PRDM5Q9NQX1 630 aaPredicted RBP17.05■□□□□ 0.32
CNOT9-205ENST00000433439 AKT3Q9Y243 479 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 PPME1Q9Y570 386 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 PCDHA2Q9Y5H9 948 aa17.05■□□□□ 0.32
CNOT9-205ENST00000433439 EVPLQ92817 2033 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 MBLAC1A4D2B0 266 aaPredicted RBP17.04■□□□□ 0.32
CNOT9-205ENST00000433439 ACTN4O43707 911 aaKnown RBP17.04■□□□□ 0.32
CNOT9-205ENST00000433439 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 CYP11B2P19099 503 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 TMOD1P28289 359 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 HOXC8P31273 242 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 DNM2P50570 870 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
CNOT9-205ENST00000433439 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 KRBA2Q6ZNG9 492 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 ANKRD33Q7Z3H0 272 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 EXOC8Q8IYI6 725 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 FMR1NBQ8N0W7 255 aaPredicted RBP17.04■□□□□ 0.32
CNOT9-205ENST00000433439 WNT8BQ93098 351 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 MAP7D2Q96T17 732 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 HTATIP2Q9BUP3 242 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 POLR3FQ9H1D9 316 aaPredicted RBP17.04■□□□□ 0.32
CNOT9-205ENST00000433439 BLZF1Q9H2G9 400 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 ZHX3Q9H4I2 956 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 XPNPEP1Q9NQW7 623 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
CNOT9-205ENST00000433439 SMIM35A0A1B0GVV1 85 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 SFI1A8K8P3 1242 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
CNOT9-205ENST00000433439 CD4P01730 458 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 VTNP04004 478 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 CTSHP09668 335 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 CASP1P29466 404 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 THPOP40225 353 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 FAAP100Q0VG06 881 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 PTK7Q13308 1070 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 C1orf53Q5VUE5 145 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 TAF2Q6P1X5 1199 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 SERINC5Q86VE9 423 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 C7orf61Q8IZ16 206 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 MCPH1Q8NEM0 835 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 TCP11Q8WWU5 503 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 SCLT1Q96NL6 688 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 PPP1R12CQ9BZL4 782 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 DACT1Q9NYF0 836 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 SUCLA2Q9P2R7 463 aaPredicted RBP17.03■□□□□ 0.32
CNOT9-205ENST00000433439 GINS2Q9Y248 185 aa17.03■□□□□ 0.32
CNOT9-205ENST00000433439 MYMKA6NI61 221 aa17.02■□□□□ 0.32
CNOT9-205ENST00000433439 RSPH10B2B2RC85 870 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms