RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 TGFB2P61812 414 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 CEP85LQ5SZL2 805 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 ZNF571Q7Z3V5 609 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-206ENST00000433118 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
SMPD4-206ENST00000433118 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
SMPD4-206ENST00000433118 PABPC4Q13310 644 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■□□□□ 9
SMPD4-206ENST00000433118 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 ARSHQ5FYA8 562 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 MREGQ8N565 214 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 KIF4AO95239 1232 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 INPP5BP32019 993 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 ZNF76P36508 570 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 IFI16Q16666 785 aaKnown RBP11.5□□□□□ -0.57
SMPD4-206ENST00000433118 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 KDM7AQ6ZMT4 941 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 PIK3R5Q8WYR1 880 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 AP1M1Q9BXS5 423 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-206ENST00000433118 PLAAQ9Y263 795 aa11.5□□□□□ -0.57
SMPD4-206ENST00000433118 OPLAHO14841 1288 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 LSP1P33241 339 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 CAP2P40123 477 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 ALKBH5Q6P6C2 394 aaKnown RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 IRF2BP2Q7Z5L9 587 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 SFR1Q86XK3 245 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 ATP6V1G3Q96LB4 118 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 CNOT7Q9UIV1 285 aaKnown RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 PITPNM2Q9BZ72 1349 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 KIAA0754O94854 1291 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 PSMC6P62333 389 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 B4GALNT4Q76KP1 1039 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 TRMT1LQ7Z2T5 733 aaKnown RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 DNM3Q9UQ16 869 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 TMX2Q9Y320 296 aa11.49□□□□□ -0.57
SMPD4-206ENST00000433118 BZW2Q9Y6E2 419 aaKnown RBP11.49□□□□□ -0.57
SMPD4-206ENST00000433118 ATAD5Q96QE3 1844 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 FLOT1O75955 427 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 CPP00450 1065 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 FAM86B2P0C5J1 330 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 USP11P51784 963 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PPARDQ03181 441 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 FRMD5Q7Z6J6 570 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 ERMNQ8TAM6 284 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 REEP2Q9BRK0 252 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 GOPCQ9HD26 462 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 CHMP2AO43633 222 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 MYBP10242 640 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PON1P27169 355 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 GIT2Q14161 759 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 KCTD19Q17RG1 926 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 ICE2Q659A1 982 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PEX26Q7Z412 305 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 VPS36Q86VN1 386 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PBKQ96KB5 322 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 DDX47Q9H0S4 455 aaKnown RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 ISCUQ9H1K1 167 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PLCB1Q9NQ66 1216 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 HACL1Q9UJ83 578 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 RGPD3A6NKT7 1758 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 RGPD4Q7Z3J3 1758 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 FRMD3A2A2Y4 597 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 HMGB1P1B2RPK0 211 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 CALUO43852 315 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 CD302Q8IX05 232 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 ZC3H3Q8IXZ2 948 aaKnown RBP11.48□□□□□ -0.57
SMPD4-206ENST00000433118 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 EPN3Q9H201 632 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 TMEM59LQ9UK28 342 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
SMPD4-206ENST00000433118 BTNL10A8MVZ5 291 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 KRIT1O00522 736 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 SART1O43290 800 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 PPP1R37O75864 691 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 AKAP3O75969 853 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 HSPA9P38646 679 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 OR2W6PQ8NHA6 318 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms