RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
TRERNA1-201ENST00000431460 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
TRERNA1-201ENST00000431460 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
TRERNA1-201ENST00000431460 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
TRERNA1-201ENST00000431460 PCDHB6Q9Y5E3 794 aa13.36□□□□□ -0.27
TRERNA1-201ENST00000431460 LAD1O00515 517 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 PAK2Q13177 524 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 NBR1Q14596 966 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 MTERF2Q49AM1 385 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 KIAA0319LQ8IZA0 1049 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 CELF4Q9BZC1 486 aaKnown RBP13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 AKT3Q9Y243 479 aa13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
TRERNA1-201ENST00000431460 COL4A4P53420 1690 aaPredicted RBP13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 EML1O00423 815 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 BMP15O95972 392 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 F13A1P00488 732 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 PTGDRQ13258 359 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 PKP1Q13835 747 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 NCAPH2Q6IBW4 605 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 SCLT1Q96NL6 688 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 OSMRQ99650 979 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 SUGCTQ9HAC7 445 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 PRDM6Q9NQX0 595 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 PADI3Q9ULW8 664 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 INSL6Q9Y581 213 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
TRERNA1-201ENST00000431460 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 BRD1O95696 1058 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 DDIT3P35638 169 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 PRPHP41219 470 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 TXKP42681 527 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 TBC1D8BQ0IIM8 1120 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 EFCAB12Q6NXP0 572 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 NME8Q8N427 588 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 TOP1MTQ969P6 601 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 TGS1Q96RS0 853 aaKnown RBP13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 MAP7D2Q96T17 732 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 C17orf80Q9BSJ5 609 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 NOC2LQ9Y3T9 749 aaKnown RBP13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 UNC80Q8N2C7 3258 aa13.33□□□□□ -0.28
TRERNA1-201ENST00000431460 ENPP3O14638 875 aa13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 HTRA4P83105 476 aaPredicted RBP13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 GRB10Q13322 594 aa13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 SKIV2LQ15477 1246 aaKnown RBP13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 FAM173BQ6P4H8 233 aa13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
TRERNA1-201ENST00000431460 MAGEB2O15479 319 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 CSPG5O95196 566 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 KCNA4P22459 653 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 TMOD1P28289 359 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 NLRP11P59045 1033 aaKnown RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 PSMC5P62195 406 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 NUCB2P80303 420 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 DRP2Q13474 957 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 PDIA5Q14554 519 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 EPHA7Q15375 998 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 SF3A1Q15459 793 aaKnown RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 PAN2Q504Q3 1202 aaKnown RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 CLIC4Q9Y696 253 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
TRERNA1-201ENST00000431460 TCHHQ07283 1943 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms