RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 AK8Q96MA6 479 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 CCDC43Q96MW1 224 aaKnown RBP20.75■□□□□ 0.91
DDR1-236ENST00000431373 AKT3Q9Y243 479 aa20.75■□□□□ 0.91
DDR1-236ENST00000431373 ACTN1P12814 892 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 LONP1P36776 959 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 NASPP49321 788 aaPredicted RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 RARRES1P49788 294 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 DNM2P50570 870 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 SLC39A14Q15043 492 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 ECM1Q16610 540 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 MICAL3Q7RTP6 2002 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 RNPC3Q96LT9 517 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 MMTAG2Q9BU76 263 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 CELF4Q9BZC1 486 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 DHX33Q9H6R0 707 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 DBR1Q9UK59 544 aaKnown RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
DDR1-236ENST00000431373 KDM3AQ9Y4C1 1321 aa20.74■□□□□ 0.91
DDR1-236ENST00000431373 A0A087WWV3 80 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 VTNP04004 478 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 MARCKSP29966 332 aaPredicted RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 STK38Q15208 465 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 FOXD4L6Q3SYB3 417 aaPredicted RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 CNKSR3Q6P9H4 555 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 FOXD4L3Q6VB84 417 aaPredicted RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 OTOP2Q7RTS6 562 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 HERVK_113Q902F9 699 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 OSBPL7Q9BZF2 842 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 MTIF3Q9H2K0 278 aaKnown RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 DDX19AQ9NUU7 478 aaKnown RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 TFIP11Q9UBB9 837 aaKnown RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 DAXXQ9UER7 740 aaPredicted RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 KIAA1024Q9UPX6 916 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 ZDHHC9Q9Y397 364 aa20.73■□□□□ 0.91
DDR1-236ENST00000431373 SRPRBQ9Y5M8 271 aaKnown RBP20.73■□□□□ 0.91
DDR1-236ENST00000431373 RANBP2P49792 3224 aaKnown RBP20.72■□□□□ 0.91
DDR1-236ENST00000431373 GAS2O43903 313 aaKnown RBP20.72■□□□□ 0.91
DDR1-236ENST00000431373 GHRP10912 638 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 GRIN1Q05586 938 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 MKRN4PQ13434 485 aaPredicted RBP20.72■□□□□ 0.91
DDR1-236ENST00000431373 DRP2Q13474 957 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 EMC2Q15006 297 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 KIZQ2M2Z5 673 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 PLEKHG4Q58EX7 1191 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 FBXO47Q5MNV8 452 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 ZNF710Q8N1W2 664 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 BMP2KQ9NSY1 1161 aaPredicted RBP20.72■□□□□ 0.91
DDR1-236ENST00000431373 FBXO2Q9UK22 296 aaPredicted RBP20.72■□□□□ 0.91
DDR1-236ENST00000431373 GINS2Q9Y248 185 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 SQORQ9Y6N5 450 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 TCHHQ07283 1943 aa20.72■□□□□ 0.91
DDR1-236ENST00000431373 SLC26A4O43511 780 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 GPR32O75388 356 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 DGAT1O75907 488 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 YEATS4O95619 227 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 NLRP11P59045 1033 aaKnown RBP20.71■□□□□ 0.91
DDR1-236ENST00000431373 LPIN1Q14693 890 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 HABP4Q5JVS0 413 aaKnown RBP20.71■□□□□ 0.91
DDR1-236ENST00000431373 HYIQ5T013 277 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 RASIP1Q5U651 963 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 TSHZ1Q6ZSZ6 1077 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 CABP7Q86V35 215 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 USP38Q8NB14 1042 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 LINC00301Q8NCQ3 95 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 DBF4BQ8NFT6 615 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 SEPT8Q92599 483 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 PPP1R16BQ96T49 567 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 MTRQ99707 1265 aa20.71■□□□□ 0.91
DDR1-236ENST00000431373 SUCLA2Q9P2R7 463 aaPredicted RBP20.71■□□□□ 0.91
DDR1-236ENST00000431373 ARHGEF35A5YM69 484 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 BAIAP3O94812 1187 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 UBA7P41226 1012 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 GPC3P51654 580 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 CRYBB1P53674 252 aaPredicted RBP20.7■□□□□ 0.9
DDR1-236ENST00000431373 CDC42EP1Q00587 391 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 ZRSR1Q15695 479 aaKnown RBP20.7■□□□□ 0.9
DDR1-236ENST00000431373 TCTN1Q2MV58 587 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 TCP11Q8WWU5 503 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 CDK5RAP3Q96JB5 506 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 IFIH1Q9BYX4 1025 aaKnown RBP20.7■□□□□ 0.9
DDR1-236ENST00000431373 NT5C3AQ9H0P0 336 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 CSRNP2Q9H175 543 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 CDHR5Q9HBB8 845 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 ATP6V0A4Q9HBG4 840 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 XPNPEP1Q9NQW7 623 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 DNM3Q9UQ16 869 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 PTPRSQ13332 1948 aa20.7■□□□□ 0.9
DDR1-236ENST00000431373 ZBBXA8MT70 800 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 SPTLC2O15270 562 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 USO1O60763 962 aaKnown RBP20.69■□□□□ 0.9
DDR1-236ENST00000431373 DNM1Q05193 864 aaKnown RBP20.69■□□□□ 0.9
DDR1-236ENST00000431373 GRB10Q13322 594 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 IKBKEQ14164 716 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 KCTD17Q8N5Z5 321 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 KRI1Q8N9T8 703 aaKnown RBP20.69■□□□□ 0.9
DDR1-236ENST00000431373 PSPC1Q8WXF1 523 aaKnown RBP20.69■□□□□ 0.9
DDR1-236ENST00000431373 APBB2Q92870 758 aa20.69■□□□□ 0.9
DDR1-236ENST00000431373 TMEM143Q96AN5 459 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms