RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 H2AFVQ71UI9 128 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 VPS36Q86VN1 386 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 METTL13Q8N6R0 699 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 PIGOQ8TEQ8 1089 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 ISCUQ9H1K1 167 aa14.52□□□□□ -0.08
SNRNP200-202ENST00000429650 A0A0A6YYK5 440 aaPredicted RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 EIF3DO15371 548 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 HSPA9P38646 679 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 CTTNQ14247 550 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 DACT2Q5SW24 774 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 STRIP1Q5VSL9 837 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 SLFN11Q7Z7L1 901 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 EIF1ADQ8N9N8 165 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 CALR3Q96L12 384 aaKnown RBP14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 HSD17B14Q9BPX1 270 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 IKZF4Q9H2S9 585 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 RABEP2Q9H5N1 569 aa14.52□□□□□ -0.09
SNRNP200-202ENST00000429650 A6NNZ2 444 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 PGRMC1O00264 195 aaKnown RBP14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 PIK3CDO00329 1044 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 FAM13AO94988 1023 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 FERP16591 822 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 ECHS1P30084 290 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 NMT1P30419 496 aaKnown RBP14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 PDCLQ13371 301 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 SLC15A2Q16348 729 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 TUBB8Q3ZCM7 444 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 SLC30A10Q6XR72 485 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.51□□□□□ -0.091e-8■■■□□ 15.6
SNRNP200-202ENST00000429650 WDR18Q9BV38 432 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 INTUQ9ULD6 942 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 STXBP5LQ9Y2K9 1186 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 NOC2LQ9Y3T9 749 aaKnown RBP14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 GFPT2O94808 682 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 GH2P01242 217 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 FKBP1AP62942 108 aaKnown RBP14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 KDM7AQ6ZMT4 941 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 C1orf186Q6ZWK4 172 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 PEX26Q7Z412 305 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 FAM186BQ8IYM0 893 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 OLIG1Q8TAK6 271 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 AP1M1Q9BXS5 423 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 TUFT1Q9NNX1 390 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 PRR12Q9ULL5 1215 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 AFF2P51816 1311 aa14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 ZNF646O15015 1829 aaPredicted RBP14.51□□□□□ -0.09
SNRNP200-202ENST00000429650 A0A1W2PRG0 241 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 TMCO5BA8MYB1 307 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 BHMG1C9JSJ3 638 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 EBAG9O00559 213 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 SLITRK3O94933 977 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 PSMC2P35998 433 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 STAT1P42224 750 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 ATP1A2P50993 1020 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 HLTFQ14527 1009 aaKnown RBP eCLIP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 NFIL3Q16649 462 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 ZC2HC1CQ53FD0 456 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 MEX3CQ5U5Q3 659 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 OTOP1Q7RTM1 612 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 MYCT1Q8N699 235 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 U2AF1L4Q8WU68 220 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 LMBR1Q8WVP7 490 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 MASTLQ96GX5 879 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 SUCLA2Q9P2R7 463 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 SLX4Q8IY92 1834 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 EVI5O60447 810 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 PDE6BP35913 854 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 CUL1Q13616 776 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 RRP1BQ14684 758 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 EMC10Q5UCC4 262 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 TPH2Q8IWU9 490 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 SPICE1Q8N0Z3 855 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 RASGEF1CQ8N431 466 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 C1orf131Q8NDD1 294 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 LNX1Q8TBB1 728 aaPredicted RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 DYDC2Q96IM9 177 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 PLAAQ9Y263 795 aa14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 RBBP6Q7Z6E9 1792 aaKnown RBP14.5□□□□□ -0.09
SNRNP200-202ENST00000429650 ZBTB39O15060 712 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 SART1O43290 800 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 PSMD10O75832 226 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 TRIM37O94972 964 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 NPEPPSP55786 919 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 RBM26Q5T8P6 1007 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 NT5DC3Q86UY8 548 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 EFCAB13Q8IY85 973 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 SYCE1Q8N0S2 351 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 RNPC3Q96LT9 517 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 DDX47Q9H0S4 455 aaKnown RBP14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 PARVGQ9HBI0 331 aa14.49□□□□□ -0.09
SNRNP200-202ENST00000429650 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms