RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-206ENST00000429440 NUTM2BA6NNL0 878 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 NUTM2EB1AL46 878 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 BOLA2-SMG1P6H3BVE0 249 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 IGKV5-2P06315 115 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 CYP21A2P08686 494 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PIM1P11309 404 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 ETS2P15036 469 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PHKG2P15735 406 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 RASSF2P50749 326 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 HLTFQ14527 1009 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 KIF22Q14807 665 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 SPA17Q15506 151 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCDC6Q16204 474 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZCWPW2Q504Y3 356 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 DEPDC1Q5TB30 811 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 Q6ZNX1 250 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF589Q86UQ0 364 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PALB2Q86YC2 1186 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 CYP4X1Q8N118 509 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 NUP93Q8N1F7 819 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PPP1R14CQ8TAE6 165 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 TLR10Q9BXR5 811 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 DRC3Q9H069 523 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 DHX36Q9H2U1 1008 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 NHEJ1Q9H9Q4 299 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 FBXL5Q9UKA1 691 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PNMA2Q9UL42 364 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PA2G4Q9UQ80 394 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 HEY1Q9Y5J3 304 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 E9PBE3 544 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 CYP4A11Q02928 519 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 GIT2Q14161 759 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 SYCP2LQ5T4T6 812 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 B3GNT6Q6ZMB0 384 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 TREML1Q86YW5 311 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 FAM186BQ8IYM0 893 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 BBS5Q8N3I7 341 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 RIBC1Q8N443 379 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 CABLES1Q8TDN4 633 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 SUCLG2Q96I99 432 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PRMT1Q99873 361 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 EURLQ9NYK6 297 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 SEC63Q9UGP8 760 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 RASAL2Q9UJF2 1139 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 PRELID1Q9Y255 219 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 MYH1P12882 1939 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 KAT6BQ8WYB5 2073 aa9.56□□□□□ -0.88
CDC42BPA-206ENST00000429440 MYH10P35580 1976 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 POTEFA5A3E0 1075 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 A6NJR5 290 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRAFD1O14545 582 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 PDE5AO76074 875 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 EYA4O95677 639 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 HOXD10P28358 340 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 GALK1P51570 392 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 SLC34A1Q06495 639 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 DMPKQ09013 629 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 OTUD7BQ6GQQ9 843 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 LRRC74BQ6ZQY2 392 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 CATIPQ7Z7H3 387 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 NELFCDQ8IXH7 590 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TTC39CQ8N584 583 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 UBLCP1Q8WVY7 318 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 KRT12Q99456 494 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 LRRC2Q9BYS8 371 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 VPS16Q9H269 839 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TLE6Q9H808 572 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 SMARCAL1Q9NZC9 954 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 EHD2Q9NZN4 543 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 FBXO9Q9UK97 447 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TNS3Q68CZ2 1445 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 GRM8O00222 908 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 MAP3K7O43318 606 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 RAD51CO43502 376 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 LCA5LO95447 670 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 NAT2P11245 290 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 CD44P16070 742 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 ENDOUP21128 410 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 CXCR5P32302 372 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 ERVK-9P63128 1117 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 RELAQ04206 551 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 UBXN1Q04323 297 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TCP11X2Q5H9J9 407 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRIM67Q6ZTA4 783 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 VPS50Q96JG6 964 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 FSD1Q9BTV5 496 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 GBA3Q9H227 469 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 TPK1Q9H3S4 243 aa9.55□□□□□ -0.88
CDC42BPA-206ENST00000429440 DENND2DQ9H6A0 471 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms