RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TTI2Q6NXR4 508 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 EPM2AIP1Q7L775 607 aaPredicted RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 NELFCDQ8IXH7 590 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 KCTD17Q8N5Z5 321 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 PPTC7Q8NI37 304 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 ZNF296Q8WUU4 475 aaPredicted RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 SCFD1Q8WVM8 642 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 EMID1Q96A84 441 aaPredicted RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 DUSP9Q99956 384 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 NAT10Q9H0A0 1025 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 CYP26B1Q9NR63 512 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 FANCLQ9NW38 375 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 SRRDQ9UH36 339 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 NFE2L3Q9Y4A8 694 aa9.84□□□□□ -0.83
SMC6-204ENST00000428868 PDCD11Q14690 1871 aaKnown RBP9.84□□□□□ -0.83
SMC6-204ENST00000428868 BECN2A8MW95 431 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 DYNC1LI2O43237 492 aaPredicted RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 CAVIN2O95810 425 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 XRCC5P13010 732 aaKnown RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 ZNF18P17022 549 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 CCNE1P24864 410 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 ERCC5P28715 1186 aaPredicted RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 CCND3P30281 292 aaPredicted RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 BEX3Q00994 111 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 CACNB2Q08289 660 aaPredicted RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 DRP2Q13474 957 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 EMC2Q15006 297 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 PTPN21Q16825 1174 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 COBLL1Q53SF7 1204 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 FAM102BQ5T8I3 360 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 ANKRD40Q6AI12 368 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 TLK2Q86UE8 772 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 MYCT1Q8N699 235 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 ENOX1Q8TC92 643 aaKnown RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 ATP8B4Q8TF62 1192 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 GLG1Q92896 1179 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 P2RX5Q93086 422 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 CCDC43Q96MW1 224 aaKnown RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 C16orf70Q9BSU1 422 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 KIFC3Q9BVG8 833 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 NIFKQ9BYG3 293 aaKnown RBP9.83□□□□□ -0.84
SMC6-204ENST00000428868 RNPEPQ9H4A4 650 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 DACH1Q9UI36 760 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 RWDD2AQ9UIY3 292 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 ODF2LQ9ULJ1 636 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 CITO14578 2027 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 BRCA2P51587 3418 aa9.83□□□□□ -0.84
SMC6-204ENST00000428868 ADGRA3Q8IWK6 1321 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 SMTNL1A8MU46 457 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 GOLGA6L19H0YKK7 550 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 DKC1O60832 514 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMC6-204ENST00000428868 FKTNO75072 461 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 PPP1R37O75864 691 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 ADCY5O95622 1261 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 GAP43P17677 238 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 PSMD2Q13200 908 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 KIF22Q14807 665 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 ZCWPW2Q504Y3 356 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 SPATA1Q5VX52 437 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 OTUD6AQ7L8S5 288 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 PLPPR4Q7Z2D5 763 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 IRF2BP1Q8IU81 584 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 GUF1Q8N442 669 aaKnown RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 KAT2BQ92831 832 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 TMEM143Q96AN5 459 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 DHTKD1Q96HY7 919 aaPredicted RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 STRA6Q9BX79 667 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 POLR3FQ9H1D9 316 aaPredicted RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 KCTD10Q9H3F6 313 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 DHX33Q9H6R0 707 aaKnown RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 AZI2Q9H6S1 392 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 MRPL44Q9H9J2 332 aaKnown RBP9.82□□□□□ -0.84
SMC6-204ENST00000428868 ATP6V0A4Q9HBG4 840 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 PARVGQ9HBI0 331 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 OLFML3Q9NRN5 406 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 KCND2Q9NZV8 630 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 COL4A3BPQ9Y5P4 624 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 RALGAPA2Q2PPJ7 1873 aa9.82□□□□□ -0.84
SMC6-204ENST00000428868 TISP43B9A030 160 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 K7ENM7 598 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 PSMA7O14818 248 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 SLC16A4O15374 487 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 DGAT1O75907 488 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 GCNT3O95395 438 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 EDN1P05305 212 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 GJB1P08034 283 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 PLS3P13797 630 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
SMC6-204ENST00000428868 ZNF75DP51815 510 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 POLGP54098 1239 aaPredicted RBP9.81□□□□□ -0.84
SMC6-204ENST00000428868 PEX3P56589 373 aa9.81□□□□□ -0.84
SMC6-204ENST00000428868 IRF5Q13568 498 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms