RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 MYCT1Q8N699 235 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 CCDC43Q96MW1 224 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 NACC1Q96RE7 527 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 MPHOSPH6Q99547 160 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 THSD7BQ9C0I4 1608 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 KDM3AQ9Y4C1 1321 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 PPP1R3GB7ZBB8 358 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 SLC16A4O15374 487 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 VTNP04004 478 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 EDN1P05305 212 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 CCDC192P0DO97 292 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 FGFR4P22455 802 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 SFNP31947 248 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 HOXD13P35453 343 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 PEX3P56589 373 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 TBC1D8BQ0IIM8 1120 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 MFSD14CQ5VZR4 134 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 DHX40Q8IX18 779 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 SMAP1Q8IYB5 467 aaPredicted RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 PPTC7Q8NI37 304 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 WNT8BQ93098 351 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 XPNPEP3Q9NQH7 507 aa10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 SAMSN1Q9NSI8 373 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-206ENST00000428842 SRGAP2CP0DJJ0 459 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 KCNA10Q16322 511 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 C4orf19Q8IY42 314 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ASAP3Q8TDY4 903 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 NOC3LQ8WTT2 800 aaKnown RBP10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 DEFB118Q96PH6 123 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 CEP89Q96ST8 783 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 C7orf25Q9BPX7 421 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 HSD3B7Q9H2F3 369 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM184BQ9ULE4 1060 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 A0A0C4DFX4 3053 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 B4DLN1 442 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ASGR1P07306 291 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 TPM2P07951 284 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 HSPA8P11142 646 aaKnown RBP10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 AKR1A1P14550 325 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 NLRP12P59046 1061 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 UVSSAQ2YD98 709 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ODR4Q5SWX8 454 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 MARCH8Q5T0T0 291 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 IQSEC1Q6DN90 963 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ATP6V0A1Q93050 837 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 ERO1AQ96HE7 468 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 FIZ1Q96SL8 496 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 CDHR5Q9HBB8 845 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 PCDHA2Q9Y5H9 948 aa10.55□□□□□ -0.72
HMGCLL1-206ENST00000428842 CCDC169A6NNP5 214 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 CLIC2O15247 247 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 SEPT4O43236 478 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 TREHO43280 583 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 LETM1O95202 739 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 HMGCRP04035 888 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 FAM47CQ5HY64 1035 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 LHX8Q68G74 356 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 VTI1AQ96AJ9 217 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 ELMO3Q96BJ8 720 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 MRPL44Q9H9J2 332 aaKnown RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 FANCLQ9NW38 375 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 USP25Q9UHP3 1055 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 GRIN2DO15399 1336 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 A6NJR5 290 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 GCNT3O95395 438 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 IQCF3P0C7M6 154 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 RARBP10826 455 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 KLRC1P26715 233 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 ATN1P54259 1190 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 TERF1P54274 439 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 EMC2Q15006 297 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 IQCB1Q15051 598 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 STX1AQ16623 288 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 DGKDQ16760 1214 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 DIS3LQ8TF46 1054 aaKnown RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 SCFD1Q8WVM8 642 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 PRPF31Q8WWY3 499 aaKnown RBP10.54□□□□□ -0.72
HMGCLL1-206ENST00000428842 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms